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"Adult", "Gonad", "Reproductive System"], [76734, "SRR25361306", "SRX21100653", "SRS18369835", "SRP450509", "PRJNA996758", "Transcriptome analysis of Zebrafish testis", "PRJNA996758", "Other", "In summary  this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq  which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.", null, null, null, null, "Zebrafish 3N 3", null, "strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 6|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "miRNA Seq of triploid zebrafish: mature testis 3", "S06", "S06", "small RNA Sample Pre Kit", null, null, "miRNA-Seq", "TRANSCRIPTOMIC", "PCR", "SINGLE", "ILLUMINA", "HiSeq X Ten", null, "SRP450509", null, null, "Zebrafish-3N-3.fq", "fastq", 377566667.0, 15350070.0, "Zebrafish 3N 3.fq", "0:24.60", "A:96137966;C:76631652;G:87723617;T:117047567;N:25865", 24, null, null, null, 96137966, 76631652, 87723617, 117047567, 25865, "SRX21100653", "SRS18369835", "SRA1676237", "Hunan Normal University|College of Life Sciences", "Hunan Normal University", 1, 0.73654, null, 0.40118, null, 0.8564, null, 0.55134, null, 20, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "full_length", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2023-07-20", "Adult", "Adult", "Gonad", "Reproductive System"], [76735, "SRR25361307", "SRX21100652", "SRS18369834", "SRP450509", "PRJNA996758", "Transcriptome analysis of Zebrafish testis", "PRJNA996758", "Other", "In summary  this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq  which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.", null, null, null, null, "Zebrafish 3N 2", null, "strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 5|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "miRNA Seq of triploid zebrafish: mature testis 2", "S05", "S05", "small RNA Sample Pre Kit", null, null, "miRNA-Seq", "TRANSCRIPTOMIC", "PCR", "SINGLE", "ILLUMINA", "HiSeq X Ten", null, "SRP450509", null, null, "Zebrafish-3N-2.fq", "fastq", 380484856.0, 15447197.0, "Zebrafish 3N 2.fq", "0:24.63", "A:97242128;C:77738745;G:86938175;T:118539773;N:26035", 24, null, null, null, 97242128, 77738745, 86938175, 118539773, 26035, "SRX21100652", "SRS18369834", "SRA1676237", "Hunan Normal University|College of Life Sciences", "Hunan Normal University", 1, 0.75732, null, 0.36733, null, 0.86003, null, 0.56474, null, 30, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "full_length", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2023-07-20", "Adult", "Adult", "Gonad", "Reproductive System"], [76736, "SRR25361308", "SRX21100651", "SRS18369833", "SRP450509", "PRJNA996758", "Transcriptome analysis of Zebrafish testis", "PRJNA996758", "Other", "In summary  this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq  which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.", null, null, null, null, "Zebrafish 3N 1", null, "strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 4|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "miRNA Seq of triploid zebrafish: mature testis 1", "S04", "S04", "small RNA Sample Pre Kit", null, null, "miRNA-Seq", "TRANSCRIPTOMIC", "PCR", "SINGLE", "ILLUMINA", "HiSeq X Ten", null, "SRP450509", null, null, "Zebrafish-3N-1.fq", "fastq", 268097774.0, 10780393.0, "Zebrafish 3N 1.fq", "0:24.87", "A:68574209;C:53994512;G:62001426;T:83509528;N:18099", 24, null, null, null, 68574209, 53994512, 62001426, 83509528, 18099, "SRX21100651", "SRS18369833", "SRA1676237", "Hunan Normal University|College of Life Sciences", "Hunan Normal University", 1, 0.76185, null, 0.39184, null, 0.86038, null, 0.55005, null, 27, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "full_length", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2023-07-20", "Adult", "Adult", "Gonad", "Reproductive System"], [76737, "SRR25361309", "SRX21100650", "SRS18369832", "SRP450509", "PRJNA996758", "Transcriptome analysis of Zebrafish testis", "PRJNA996758", "Other", "In summary  this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq  which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.", null, null, null, null, "Zebrafish 2N 3", null, "strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 3|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "miRNA Seq of diploid zebrafish: mature testis 3", "S03", "S03", "small RNA Sample Pre Kit", null, null, "miRNA-Seq", "TRANSCRIPTOMIC", "PCR", "SINGLE", "ILLUMINA", "HiSeq X Ten", null, "SRP450509", null, null, "Zebrafish-2N-3.fq", "fastq", 534146242.0, 21237464.0, "Zebrafish 2N 3.fq", "0:25.15", "A:134813196;C:109988603;G:122363487;T:166967106;N:13850", 25, null, null, null, 134813196, 109988603, 122363487, 166967106, 13850, "SRX21100650", "SRS18369832", "SRA1676237", "Hunan Normal University|College of Life Sciences", "Hunan Normal University", 1, 0.78557, null, 0.41489, null, 0.84682, null, 0.52155, null, 26, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "full_length", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2023-07-20", "Adult", "Adult", "Gonad", "Reproductive System"], [76738, "SRR25361310", "SRX21100649", "SRS18369831", "SRP450509", "PRJNA996758", "Transcriptome analysis of Zebrafish testis", "PRJNA996758", "Other", "In summary  this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq  which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.", null, null, null, null, "Zebrafish 2N 2", null, "strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 2|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "miRNA Seq of diploid zebrafish: mature testis 2", "S02", "S02", "small RNA Sample Pre Kit", null, null, "miRNA-Seq", "TRANSCRIPTOMIC", "PCR", "SINGLE", "ILLUMINA", "HiSeq X Ten", null, "SRP450509", null, null, "Zebrafish-2N-2.fq", "fastq", 356097642.0, 14145771.0, "Zebrafish 2N 2.fq", "0:25.17", "A:90441485;C:73979402;G:81604410;T:110063163;N:9182", 25, null, null, null, 90441485, 73979402, 81604410, 110063163, 9182, "SRX21100649", "SRS18369831", "SRA1676237", "Hunan Normal University|College of Life Sciences", "Hunan Normal University", 1, 0.75286, null, 0.42266, null, 0.8561, null, 0.55388, null, 25, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "full_length", "random_priming", "unknown", "bulk", "unknown", "unknown", null, "China", "2023-07-20", "Adult", "Adult", "Gonad", "Reproductive System"], [76739, "SRR25361311", "SRX21100648", "SRS18369830", "SRP450509", "PRJNA996758", "Transcriptome analysis of Zebrafish testis", "PRJNA996758", "Other", "In summary  this study obtained whole transcriptome data of mature testis of triploid zebrafish by RNA seq  which provided a data platform for the study of reproductive development of triploid fish. Screening and identification of miRNAs related to spermatogenesis in zebrafish.", null, null, null, null, "Zebrafish 2N 1", null, "strain:not collected|age:3 mpf|collection date:not collected|geo loc name:not applicable|sex:male|tissue:testis|replicate:biological replicate 1|BioSampleModel:Model organism or animal", null, null, null, null, null, null, null, null, "miRNA Seq of diploid zebrafish: mature testis 1", "S01", "S01", "small RNA Sample Pre Kit", null, null, "miRNA-Seq", "TRANSCRIPTOMIC", "PCR", "SINGLE", "ILLUMINA", "HiSeq X Ten", null, "SRP450509", null, null, "Zebrafish-2N-1.fq", "fastq", 304073792.0, 11993451.0, "Zebrafish 2N 1.fq", "0:25.35", "A:78785751;C:62508430;G:69338558;T:93420600;N:20453", 25, null, null, null, 78785751, 62508430, 69338558, 93420600, 20453, "SRX21100648", "SRS18369830", "SRA1676237", "Hunan Normal University|College of Life Sciences", "Hunan Normal University", 1, 0.77026, null, 0.38872, null, 0.86032, null, 0.58206, null, 23, null, "B", null, 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[experiment.alias], [experiment.library_name], [experiment.design_description], [experiment.library_construction_protocol], [experiment.attributes], [experiment.library_strategy], [experiment.library_source], [experiment.library_selection], [experiment.library_layout], [experiment.platform], [experiment.instrument_model], [experiment.spot_descriptor], [experiment.study_ref], [run.title], [run.attributes], [run.filename], [run.semantic_name], [run.total_bases], [run.total_spots], [run.alias], [run.read_lengths], [run.base_counts], [run.r1_length], [run.r2_length], [run.r3_length], [run.r4_length], [run.Acount], [run.Ccount], [run.Gcount], [run.Tcount], [run.Ncount], [run.experiment], [run.pool_member], [submission.accession], [submission.srasource], [submission.bioprojectsource], [seqdetective.n_mates], [seqdetective.mapping_rate.mate1], [seqdetective.mapping_rate.mate2], [seqdetective.nofeature_rate.mate1], [seqdetective.nofeature_rate.mate2], [seqdetective.sparsity.mate1], [seqdetective.sparsity.mate2], [seqdetective.pos_strand_rate.mate1], [seqdetective.pos_strand_rate.mate2], [seqdetective.readlen.mate1], [seqdetective.readlen.mate2], [seqdetective.judgement.mate1], [seqdetective.judgement.mate2], [seqdetective.judgement.reason], platform_family, instrument_generation, read_bias, selection_class, prep_kit, sc_or_bulk, tech_class, technology, tech_variant, [submission.bioprojectsource.country], earliest_date, devstage_curation, devstage_curation_coarse, tissue_curation, tissue_curation_coarse from run_metadata where \"experiment.library_layout\" = :p0 and \"experiment.library_selection\" = :p1 and \"tissue_curation_coarse\" = :p2 order by rowid limit 101", "params": {"p0": "SINGLE", "p1": "PCR", "p2": "Reproductive System"}}, "facet_results": {"experiment.library_strategy": {"name": "experiment.library_strategy", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "miRNA-Seq", "label": "miRNA-Seq", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System&experiment.library_strategy=miRNA-Seq", "selected": false}], "truncated": false}, "experiment.library_source": {"name": "experiment.library_source", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "TRANSCRIPTOMIC", "label": "TRANSCRIPTOMIC", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System&experiment.library_source=TRANSCRIPTOMIC", "selected": false}], "truncated": false}, "experiment.library_selection": {"name": "experiment.library_selection", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "PCR", "label": "PCR", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&tissue_curation_coarse=Reproductive+System", "selected": true}], "truncated": false}, "experiment.library_layout": {"name": "experiment.library_layout", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "SINGLE", "label": "SINGLE", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "selected": true}], "truncated": false}, "experiment.platform": {"name": "experiment.platform", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "ILLUMINA", "label": "ILLUMINA", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System&experiment.platform=ILLUMINA", "selected": false}], "truncated": false}, "devstage_curation_coarse": {"name": "devstage_curation_coarse", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "Adult", "label": "Adult", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System&devstage_curation_coarse=Adult", "selected": false}], "truncated": false}, "devstage_curation": {"name": "devstage_curation", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "Adult", "label": "Adult", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System&devstage_curation=Adult", "selected": false}], "truncated": false}, "tissue_curation_coarse": {"name": "tissue_curation_coarse", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "Reproductive System", "label": "Reproductive System", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR", "selected": true}], "truncated": false}, "tissue_curation": {"name": "tissue_curation", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "Gonad", "label": "Gonad", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System&tissue_curation=Gonad", "selected": false}], "truncated": false}, "technology": {"name": "technology", "type": "column", "hideable": false, "toggle_url": "/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System", "results": [{"value": "unknown", "label": "unknown", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/run_metadata.json?experiment.library_layout=SINGLE&experiment.library_selection=PCR&tissue_curation_coarse=Reproductive+System&technology=unknown", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 73.73096200171858}