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In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 97 individuals", "Dr bud 2", "SAMD00028154", null, "sample name:Dr bud 2|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:bud|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028154", "DRX029563", "Dr bud 2", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028154", null, null, null, 4104778200.0, 41047782.0, "DRR032757", "0:100 1:0", "A:1116316188;C:944738800;G:936257056;T:1107423486;N:42670", 100, 0, null, null, 1116316188, 944738800, 936257056, 1107423486, 42670, "DRX029563", "DRS049962", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.92945, null, 0.10493, null, 0.73407, null, 0.47824, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Undetermined", "Embryo", "Whole Organism", "All anatomical structures"], [68, "DRR032756", "DRX029562", "DRS049961", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. 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In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 114 individuals", "Dr 8cell 2", "SAMD00028150", null, "sample name:Dr 8cell 2|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:8cell|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028150", "DRX029559", "Dr 8cell 2", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028150", null, null, null, 3708921900.0, 37089219.0, "DRR032753", "0:100 1:0", "A:985502141;C:874161613;G:869551685;T:979663686;N:42775", 100, 0, null, null, 985502141, 874161613, 869551685, 979663686, 42775, "DRX029559", "DRS049958", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.93329, null, 0.02366, null, 0.78896, null, 0.47447, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [72, "DRR032752", "DRX029558", "DRS049957", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 96 individuals", "Dr 8cell 1", "SAMD00028149", null, "sample name:Dr 8cell 1|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:8cell|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028149", "DRX029558", "Dr 8cell 1", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028149", null, null, null, 3666991200.0, 36669912.0, "DRR032752", "0:100 1:0", "A:976118513;C:862559696;G:858017821;T:970254302;N:40868", 100, 0, null, null, 976118513, 862559696, 858017821, 970254302, 40868, "DRX029558", "DRS049957", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.934, null, 0.02403, null, 0.78877, null, 0.46902, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [73, "DRR032751", "DRX029557", "DRS049956", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 100 individuals", "Dr 75epiboly 2", "SAMD00028148", null, "sample name:Dr 75epiboly 2|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:75epiboly|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028148", "DRX029557", "Dr 75epiboly 2", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028148", null, null, null, 3252021500.0, 32520215.0, "DRR032751", "0:100 1:0", "A:885527595;C:746750899;G:742907892;T:876794123;N:40991", 100, 0, null, null, 885527595, 746750899, 742907892, 876794123, 40991, "DRX029557", "DRS049956", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.92594, null, 0.10181, null, 0.74862, null, 0.47789, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Gastrula", "Embryo", "Whole Organism", "All anatomical structures"], [74, "DRR032750", "DRX029556", "DRS049955", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 100 individuals", "Dr 75epiboly 1", "SAMD00028147", null, "sample name:Dr 75epiboly 1|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:75epiboly|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028147", "DRX029556", "Dr 75epiboly 1", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028147", null, null, null, 3785053700.0, 37850537.0, "DRR032750", "0:100 1:0", "A:1029014798;C:870946157;G:867537069;T:1017508684;N:46992", 100, 0, null, null, 1029014798, 870946157, 867537069, 1017508684, 46992, "DRX029556", "DRS049955", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.92346, null, 0.10046, null, 0.74921, null, 0.47295, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Gastrula", "Embryo", "Whole Organism", "All anatomical structures"], [77, "DRR032747", "DRX029553", "DRS049952", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 50 individuals", "Dr 6somite 2", "SAMD00028144", null, "sample name:Dr 6somite 2|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:6somite|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028144", "DRX029553", "Dr 6somite 2", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028144", null, null, null, 3704431000.0, 37044310.0, "DRR032747", "0:100 1:0", "A:1001844161;C:856702913;G:850695568;T:995148798;N:39560", 100, 0, null, null, 1001844161, 856702913, 850695568, 995148798, 39560, "DRX029553", "DRS049952", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.92633, null, 0.09211, null, 0.72107, null, 0.47195, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Segmentation", "Embryo", "Whole Organism", "All anatomical structures"], [78, "DRR032746", "DRX029552", "DRS049951", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 50 individuals", "Dr 6somite 1", "SAMD00028143", null, "sample name:Dr 6somite 1|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:6somite|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028143", "DRX029552", "Dr 6somite 1", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028143", null, null, null, 3529311900.0, 35293119.0, "DRR032746", "0:100 1:0", "A:953957996;C:816824469;G:811403696;T:947089530;N:36209", 100, 0, null, null, 953957996, 816824469, 811403696, 947089530, 36209, "DRX029552", "DRS049951", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.92437, null, 0.09257, null, 0.72113, null, 0.47004, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Segmentation", "Embryo", "Whole Organism", "All anatomical structures"], [79, "DRR032745", "DRX029551", "DRS049950", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 50 individuals", "Dr 60h 2", "SAMD00028142", null, "sample name:Dr 60h 2|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:60h Pec fin|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028142", "DRX029551", "Dr 60h 2", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028142", null, null, null, 3875337000.0, 38753370.0, "DRR032745", "0:100 1:0", "A:1042558903;C:899892111;G:896867583;T:1035981420;N:36983", 100, 0, null, null, 1042558903, 899892111, 896867583, 1035981420, 36983, "DRX029551", "DRS049950", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.91891, null, 0.09445, null, 0.66156, null, 0.45564, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Hatching", "Embryo", "Whole Organism", "All anatomical structures"], [80, "DRR032744", "DRX029550", "DRS049949", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 50 individuals", "Dr 60h 1", "SAMD00028141", null, "sample name:Dr 60h 1|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:60h Pec fin|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028141", "DRX029550", "Dr 60h 1", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028141", null, null, null, 3538468200.0, 35384682.0, "DRR032744", "0:100 1:0", "A:960664313;C:812459988;G:809014008;T:956295205;N:34686", 100, 0, null, null, 960664313, 812459988, 809014008, 956295205, 34686, "DRX029550", "DRS049949", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.91388, null, 0.10346, null, 0.66076, null, 0.45203, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Hatching", "Embryo", "Whole Organism", "All anatomical structures"], [84, "DRR032740", "DRX029546", "DRS049945", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. In brief  taking advantages of Illumina sequencing  RNAseq profiles of early to late embryos of 8 chordate species were identified with biological replicates two or more biological replicates.", null, null, "mRNA extracted from pooled embryos of 50 individuals", "Dr 48h 2", "SAMD00028137", null, "sample name:Dr 48h 2|strain:Riken WT Wild Type|tissue type:whole embryo|dev stage:48h Long pec|genotype:wild type|phenotype:wild type|sex:male  female  and mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 sequencing of SAMD00028137", "DRX029546", "Dr 48h 2", "1", "Total RNA QIAGEN RNeasy followed by TruSeq", null, "RNA-Seq", "TRANSCRIPTOMIC", "other", "SINGLE", "ILLUMINA", "Illumina HiSeq 2000", "<SPOT_DESCRIPTOR><SPOT_DECODE_SPEC><SPOT_LENGTH>100</SPOT_LENGTH><READ_SPEC><READ_INDEX>0</READ_INDEX><READ_CLASS>Application Read</READ_CLASS><READ_TYPE>Forward</READ_TYPE><BASE_COORD>1</BASE_COORD></READ_SPEC></SPOT_DECODE_SPEC></SPOT_DESCRIPTOR>", "DRP003810", "Illumina HiSeq 2000 sequencing of SAMD00028137", null, null, null, 3702804700.0, 37028047.0, "DRR032740", "0:100 1:0", "A:993931475;C:862403562;G:857808891;T:988623734;N:37038", 100, 0, null, null, 993931475, 862403562, 857808891, 988623734, 37038, "DRX029546", "DRS049945", "DRA003460", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", "UT-BS|Lab for embryology, Department of Biological Sciences, University of Tokyo", 1, 0.92508, null, 0.08526, null, 0.68349, null, 0.45769, null, 100, null, "B", null, "usable mapping rate", "illumina", "hiseq_era", "unknown", "other", "trueseq", "bulk", "unknown", "unknown", null, "Japan", "2017-09-20", "Hatching", "Embryo", "Whole Organism", "All anatomical structures"], [85, "DRR032739", "DRX029545", "DRS049944", "DRP003810", "PRJDB3785", "EXPANDE project", "DRP003810", "Other", "EXPression AloNg Development and Evolution EXPANDE project aims to identify gene expression profiles expanded during embryogenesis and evolution. 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A 8 base indexing sequence TGGCTCAG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:6b25d0c0 a001 11e5 a811 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18913 4#19", "15566081", "Illumina sequencing of library 15566081  constructed from sample accession ERS1021927 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18913 4.  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This submission includes reads tagged with the sequence TCATTGAG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_4#18.cram", "cram", 1531590060.0, 11781462.0, "SC RUN 18913 4#18", "0:55 1:75", "A:406121824;C:277860783;G:272778741;T:574553170;N:275542", 55, 75, null, null, 406121824, 277860783, 272778741, 574553170, 275542, "ERX1502394", "ERS1021926", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.27619, 0.6213, 0.16528, 0.15917, 0.95341, 0.85117, 0.55441, 0.5349, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Segmentation", "Embryo", "Whole Organism", "All anatomical structures"], [3114, "ERR1432015", "ERX1502393", "ERS1021925", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 125 1 pool5", "SAMEA3714776", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Segmentation:14 19 somites   ZFS:0000026|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714776|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:43:10Z|INSDC status:public|Submitter Id:6b1a5f10 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 125 clutch 1  collected at segmentation   14   19 somites stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TCCAGTCG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_4#17.cram", "cram", 1497862990.0, 11522023.0, "SC RUN 18913 4#17", "0:55 1:75", "A:383210097;C:276781176;G:278130361;T:559485459;N:255897", 55, 75, null, null, 383210097, 276781176, 278130361, 559485459, 255897, "ERX1502393", "ERS1021925", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.27974, 0.64305, 0.15579, 0.14372, 0.95217, 0.84975, 0.59974, 0.42095, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Segmentation", "Embryo", "Whole Organism", "All anatomical structures"], [3115, "ERR1432014", "ERX1502392", "ERS1021924", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 125 1 pool4", "SAMEA3714775", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Segmentation:14 19 somites   ZFS:0000026|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714775|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:43:10Z|INSDC status:public|Submitter Id:6b15a420 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 125 clutch 1  collected at segmentation   14   19 somites stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TCAGGAGG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_4#15.cram", "cram", 1241517290.0, 9550133.0, "SC RUN 18913 4#15", "0:55 1:75", "A:327215004;C:237333883;G:227390823;T:449357212;N:220368", 55, 75, null, null, 327215004, 237333883, 227390823, 449357212, 220368, "ERX1502391", "ERS1021923", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.28117, 0.60443, 0.16535, 0.15129, 0.95294, 0.86009, 0.5843, 0.55975, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Segmentation", "Embryo", "Whole Organism", "All anatomical structures"], [3117, "ERR1432012", "ERX1502390", "ERS1021922", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 125 1 pool2", "SAMEA3714773", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Segmentation:14 19 somites   ZFS:0000026|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714773|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:43:09Z|INSDC status:public|Submitter Id:6b0bb910 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 125 clutch 1  collected at segmentation   14   19 somites stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TCGAAGTG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_4#9.cram", "cram", 1225767920.0, 9428984.0, "SC RUN 18913 4#9", "0:55 1:75", "A:309872078;C:230598953;G:224148743;T:460928540;N:219606", 55, 75, null, null, 309872078, 230598953, 224148743, 460928540, 219606, "ERX1502385", "ERS1021917", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.26942, 0.66213, 0.14653, 0.14991, 0.95213, 0.84549, 0.52408, 0.53104, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Segmentation", "Embryo", "Whole Organism", "All anatomical structures"], [3123, "ERR1432006", "ERX1502384", "ERS1021916", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 125 1 8", "SAMEA3714767", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Segmentation:14 19 somites   ZFS:0000026|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714767|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:43:06Z|INSDC status:public|Submitter Id:6aed5ba0 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a single wild type zebrafish embryo from ZMP phenotype 125 clutch 1  collected at segmentation   14   19 somites stage plus ERCC spike mix 2 Ambion. 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A 8 base indexing sequence TACAGGAT is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:6ad98580 a001 11e5 a811 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18913 4#4", "15566066", "Illumina sequencing of library 15566066  constructed from sample accession ERS1021912 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18913 4.  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This submission includes reads tagged with the sequence TACTAGTC.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_3#23.cram", "cram", 1112130630.0, 8554851.0, "SC RUN 18913 3#23", "0:55 1:75", "A:302953719;C:145651421;G:141893144;T:521502913;N:129433", 55, 75, null, null, 302953719, 145651421, 141893144, 521502913, 129433, "ERX1502375", "ERS1021884", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.54907, 0.68876, 0.5201, 0.14968, 0.98285, 0.84441, 0.7752, 0.58095, 55, 75, "B", "B", "biological fallback assumption", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Blastula", "Embryo", "Whole Organism", "All anatomical structures"], [3133, "ERR1431996", "ERX1502374", "ERS1021883", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 131 1 pool10", "SAMEA3714734", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Blastula:1k cell   ZFS:0000011|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714734|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:42:49Z|INSDC status:public|Submitter Id:36baee60 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 131 clutch 1  collected at blastula   1k cell stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TAGTCTTG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_3#7.cram", "cram", 1636224720.0, 12586344.0, "SC RUN 18913 3#7", "0:55 1:75", "A:440825191;C:228551875;G:220027913;T:746634386;N:185355", 55, 75, null, null, 440825191, 228551875, 220027913, 746634386, 185355, "ERX1502359", "ERS1021868", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.46379, 0.69316, 0.4377, 0.15391, 0.98261, 0.8407, 0.70581, 0.56315, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Blastula", "Embryo", "Whole Organism", "All anatomical structures"], [3149, "ERR1431980", "ERX1502358", "ERS1021867", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 131 1 6", "SAMEA3714718", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Blastula:1k cell   ZFS:0000011|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714718|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:42:40Z|INSDC status:public|Submitter Id:36452220 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a single wild type zebrafish embryo from ZMP phenotype 131 clutch 1  collected at blastula   1k cell stage plus ERCC spike mix 2 Ambion. A 8 base indexing sequence TGTGGTTG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:36452220 a001 11e5 a811 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18913 3#6", "15566021", "Illumina sequencing of library 15566021  constructed from sample accession ERS1021867 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18913 3.  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A 8 base indexing sequence TCCTCAAT is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:36404020 a001 11e5 a811 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18913 3#5", "15566020", "Illumina sequencing of library 15566020  constructed from sample accession ERS1021866 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18913 3.  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A 8 base indexing sequence TACAGGAT is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:363b5e20 a001 11e5 a811 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18913 3#4", "15566019", "Illumina sequencing of library 15566019  constructed from sample accession ERS1021865 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18913 3.  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This submission includes reads tagged with the sequence TAGTGACT.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_3#3.cram", "cram", 1111578520.0, 8550604.0, "SC RUN 18913 3#3", "0:55 1:75", "A:297278952;C:158713861;G:155652941;T:499805763;N:127003", 55, 75, null, null, 297278952, 158713861, 155652941, 499805763, 127003, "ERX1502355", "ERS1021864", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.49997, 0.68267, 0.46045, 0.14495, 0.98086, 0.83976, 0.77511, 0.60087, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Blastula", "Embryo", "Whole Organism", "All anatomical structures"], [3153, "ERR1431976", "ERX1502354", "ERS1021863", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 131 1 2", "SAMEA3714714", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Blastula:1k cell   ZFS:0000011|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714714|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:42:39Z|INSDC status:public|Submitter Id:36314c00 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a single wild type zebrafish embryo from ZMP phenotype 131 clutch 1  collected at blastula   1k cell stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TTCCTGCT.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 06 01|ENA LAST UPDATE:2018 11 16", "18913_3#2.cram", "cram", 1006934240.0, 7745648.0, "SC RUN 18913 3#2", "0:55 1:75", "A:267035624;C:147762350;G:156033450;T:435988613;N:114203", 55, 75, null, null, 267035624, 147762350, 156033450, 435988613, 114203, "ERX1502354", "ERS1021863", "ERA640034", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.49352, 0.67572, 0.43148, 0.10196, 0.98029, 0.84291, 0.81781, 0.65105, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Blastula", "Embryo", "Whole Organism", "All anatomical structures"], [3154, "ERR1431975", "ERX1502353", "ERS1021862", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 131 1 1", "SAMEA3714713", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Blastula:1k cell   ZFS:0000011|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 06 01|ENA last update:2015 12 16|External Id:SAMEA3714713|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 06 01T09:22:13Z|INSDC last update:2015 12 16T13:42:38Z|INSDC status:public|Submitter Id:362ba6b0 a001 11e5 a811 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a single wild type zebrafish embryo from ZMP phenotype 131 clutch 1  collected at blastula   1k cell stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TTCAGCTC.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#24.cram", "cram", 682856330.0, 5252741.0, "SC RUN 18730 4#24", "0:55 1:75", "A:168217714;C:139075008;G:141169282;T:234338870;N:55456", 55, 75, null, null, 168217714, 139075008, 141169282, 234338870, 55456, "ERX1481464", "ERS1021813", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.22601, 0.6266, 0.06302, 0.07433, 0.95848, 0.87767, 0.77147, 0.72121, 55, 75, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3156, "ERR1410224", "ERX1481463", "ERS1021812", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool11", "SAMEA3714663", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714663|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:10Z|INSDC status:public|Submitter Id:e91834b0 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TACTAGTC.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#23.cram", "cram", 784669730.0, 6035921.0, "SC RUN 18730 4#23", "0:55 1:75", "A:193369040;C:154930839;G:157589012;T:278718023;N:62816", 55, 75, null, null, 193369040, 154930839, 157589012, 278718023, 62816, "ERX1481463", "ERS1021812", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.22113, 0.66423, 0.05856, 0.07177, 0.95899, 0.86705, 0.76036, 0.71777, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3157, "ERR1410223", "ERX1481462", "ERS1021811", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool10", "SAMEA3714662", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714662|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:45Z|INSDC last update:2015 12 16T13:42:10Z|INSDC status:public|Submitter Id:e90c9bf0 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. A 8 base indexing sequence TCAGATTC is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e90c9bf0 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#22", "15565965", "Illumina sequencing of library 15565965  constructed from sample accession ERS1021811 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  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A 8 base indexing sequence TATGCCAG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e8fe4410 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#21", "15565964", "Illumina sequencing of library 15565964  constructed from sample accession ERS1021810 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  This submission includes reads tagged with the sequence TATGCCAG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#21.cram", "cram", 1160974880.0, 8930576.0, "SC RUN 18730 4#21", "0:55 1:75", "A:287583127;C:233701395;G:225242195;T:414354028;N:94135", 55, 75, null, null, 287583127, 233701395, 225242195, 414354028, 94135, "ERX1481461", "ERS1021810", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.20242, 0.60852, 0.05828, 0.06484, 0.95568, 0.87456, 0.67452, 0.38749, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3159, "ERR1410221", "ERX1481460", "ERS1021809", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool8", "SAMEA3714660", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714660|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:08Z|INSDC status:public|Submitter Id:e8f2d260 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. A 8 base indexing sequence TGGCTCAG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e8f2d260 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#20", "15565963", "Illumina sequencing of library 15565963  constructed from sample accession ERS1021809 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  This submission includes reads tagged with the sequence TGGCTCAG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#20.cram", "cram", 1041644630.0, 8012651.0, "SC RUN 18730 4#20", "0:55 1:75", "A:250361997;C:216927117;G:209137594;T:365137042;N:80880", 55, 75, null, null, 250361997, 216927117, 209137594, 365137042, 80880, "ERX1481460", "ERS1021809", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.23722, 0.6381, 0.05317, 0.07562, 0.95503, 0.87671, 0.75995, 0.72353, 55, 75, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3160, "ERR1410220", "ERX1481459", "ERS1021808", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool7", "SAMEA3714659", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714659|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:45Z|INSDC last update:2015 12 16T13:42:08Z|INSDC status:public|Submitter Id:e8e787c0 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. A 8 base indexing sequence TCATTGAG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e8e787c0 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#19", "15565962", "Illumina sequencing of library 15565962  constructed from sample accession ERS1021808 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  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This submission includes reads tagged with the sequence TGTATGCG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#18.cram", "cram", 1001271050.0, 7702085.0, "SC RUN 18730 4#18", "0:55 1:75", "A:249131077;C:206043698;G:193568917;T:352446609;N:80749", 55, 75, null, null, 249131077, 206043698, 193568917, 352446609, 80749, "ERX1481458", "ERS1021807", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.22004, 0.6117, 0.05313, 0.0656, 0.95095, 0.8758, 0.70135, 0.69364, 55, 75, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3162, "ERR1410218", "ERX1481457", "ERS1021806", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool5", "SAMEA3714657", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714657|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:45Z|INSDC last update:2015 12 16T13:42:06Z|INSDC status:public|Submitter Id:e8b183a0 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. A 8 base indexing sequence TCCAGTCG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e8b183a0 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#17", "15565960", "Illumina sequencing of library 15565960  constructed from sample accession ERS1021806 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  This submission includes reads tagged with the sequence TCCAGTCG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#17.cram", "cram", 1240938140.0, 9545678.0, "SC RUN 18730 4#17", "0:55 1:75", "A:302318036;C:249218633;G:246601321;T:442702025;N:98125", 55, 75, null, null, 302318036, 249218633, 246601321, 442702025, 98125, "ERX1481457", "ERS1021806", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.23057, 0.63523, 0.05319, 0.067, 0.95213, 0.86695, 0.69753, 0.68537, 55, 75, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3163, "ERR1410217", "ERX1481456", "ERS1021805", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool4", "SAMEA3714656", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714656|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:06Z|INSDC status:public|Submitter Id:e8ab9030 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TAAGTTCG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#16.cram", "cram", 942829030.0, 7252531.0, "SC RUN 18730 4#16", "0:55 1:75", "A:225274547;C:196341691;G:188483755;T:332654028;N:75009", 55, 75, null, null, 225274547, 196341691, 188483755, 332654028, 75009, "ERX1481456", "ERS1021805", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.21889, 0.64365, 0.04363, 0.07265, 0.95181, 0.87478, 0.70501, 0.69162, 55, 75, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3164, "ERR1410216", "ERX1481455", "ERS1021804", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool3", "SAMEA3714655", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714655|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:05Z|INSDC status:public|Submitter Id:e8a5eae0 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. A 8 base indexing sequence TCAGGAGG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e8a5eae0 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#15", "15565958", "Illumina sequencing of library 15565958  constructed from sample accession ERS1021804 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  This submission includes reads tagged with the sequence TCAGGAGG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#15.cram", "cram", 992671030.0, 7635931.0, "SC RUN 18730 4#15", "0:55 1:75", "A:241776762;C:210080049;G:195284057;T:345448849;N:81313", 55, 75, null, null, 241776762, 210080049, 195284057, 345448849, 81313, "ERX1481455", "ERS1021804", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.21439, 0.6195, 0.04725, 0.05379, 0.95191, 0.87606, 0.67336, 0.65016, 55, 75, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3165, "ERR1410215", "ERX1481454", "ERS1021803", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 pool2", "SAMEA3714654", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714654|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:05Z|INSDC status:public|Submitter Id:e89cc320 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a pool of 8 wild type zebrafish embryos from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. 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A 8 base indexing sequence TACTTCGG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e897ba10 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#13", "15565956", "Illumina sequencing of library 15565956  constructed from sample accession ERS1021802 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  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A 8 base indexing sequence TGAACTGG is bases 13 to 20 of read 1 followed by CG and polyT.|sample name:e89262e0 a000 11e5 800b 68b59976a382|strain:mixed", null, null, null, null, null, null, null, null, "Illumina HiSeq 2000 paired end sequencing", "SC EXP 18730 4#12", "15565955", "Illumina sequencing of library 15565955  constructed from sample accession ERS1021801 for study accession ERP013756.  This is part of an Illumina multiplexed sequencing run 18730 4.  This submission includes reads tagged with the sequence TGAACTGG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#12.cram", "cram", 1071792020.0, 8244554.0, "SC RUN 18730 4#12", "0:55 1:75", "A:266291261;C:216074486;G:207838804;T:381495628;N:91841", 55, 75, null, null, 266291261, 216074486, 207838804, 381495628, 91841, "ERX1481452", "ERS1021801", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.19027, 0.64477, 0.0489, 0.06997, 0.95268, 0.86371, 0.66594, 0.67162, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3168, "ERR1410212", "ERX1481451", "ERS1021800", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 11", "SAMEA3714651", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714651|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:03Z|INSDC status:public|Submitter Id:e88d59d0 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a single wild type zebrafish embryo from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TAACGCTG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#10.cram", "cram", 889043870.0, 6838799.0, "SC RUN 18730 4#10", "0:55 1:75", "A:223435089;C:179282347;G:171273337;T:314981588;N:71509", 55, 75, null, null, 223435089, 179282347, 171273337, 314981588, 71509, "ERX1481450", "ERS1021799", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.19054, 0.6472, 0.0467, 0.06495, 0.953, 0.86519, 0.68221, 0.68725, 55, 75, "T", "B", "mate1 technical by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3170, "ERR1410210", "ERX1481449", "ERS1021798", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 9", "SAMEA3714649", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714649|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:02Z|INSDC status:public|Submitter Id:e88320a0 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a single wild type zebrafish embryo from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. 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This submission includes reads tagged with the sequence TCGAAGTG.", "Transcriptome counting qPCR only", null, "RNA-Seq", "TRANSCRIPTOMIC", "cDNA", "PAIRED", "ILLUMINA", "Illumina HiSeq 2000", null, "ERP013756", "Illumina HiSeq 2000 paired end sequencing", "ENA FIRST PUBLIC:2016 05 10|ENA LAST UPDATE:2018 11 16", "18730_4#9.cram", "cram", 987809940.0, 7598538.0, "SC RUN 18730 4#9", "0:55 1:75", "A:248484130;C:197140774;G:188385871;T:353715305;N:83860", 55, 75, null, null, 248484130, 197140774, 188385871, 353715305, 83860, "ERX1481449", "ERS1021798", "ERA620320", "European Nucleotide Archive", "Wellcome Sanger Institute", 2, 0.2215, 0.62639, 0.05009, 0.06362, 0.94959, 0.86689, 0.63702, 0.63984, 55, 75, "B", "B", "mate1-mate2 similar by mapping diff", "illumina", "hiseq_era", "3prime", "cdna_unspecified", "unknown", "bulk", "unknown", "unknown", null, "United Kingdom", "2015-12-16", "Cleavage", "Embryo", "Whole Organism", "All anatomical structures"], [3171, "ERR1410209", "ERX1481448", "ERS1021797", "ERP013756", "PRJEB12296", "Baseline expression from transcriptional profiling of zebrafish developmental stages 2", "Baseline_expression_from_transcriptional_profiling_of_zebrafish_developmental_stages_2-sc-4029", "Transcriptome Analysis", "Paired end sequence data from the IlluminaHiSeq was prepared from RNA of wild type zebrafish embryos at different stages of development for baseline transcriptional profiling", "ArrayExpress:E ERAD 453", null, null, "ZMP phenotype 128 1 8", "SAMEA3714648", "Wellcome Sanger Institute", "ArrayExpress DevelopmentalStage:Cleavage:2 cell   ZFS:0000002|ArrayExpress OrganismPart:Whole embryo|ArrayExpress Species:Danio rerio|ENA first public:2016 05 10|ENA last update:2015 12 16|External Id:SAMEA3714648|INSDC center alias:SC|INSDC center name:Wellcome Sanger Institute|INSDC first public:2016 05 10T14:31:44Z|INSDC last update:2015 12 16T13:42:02Z|INSDC status:public|Submitter Id:e87d5440 a000 11e5 800b 68b59976a382|common name:zebrafish|sample description:3 prime end enriched mRNA from a single wild type zebrafish embryo from ZMP phenotype 128 clutch 1  collected at cleavage   2 cell stage plus ERCC spike mix 2 Ambion. 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