RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where tax_kingdom = "Fungi", tax_phylum = "Sanchytriomycota" and tax_superkingdom = "Eukaryota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Eukaryota · 17 ✖

tax_phylum 1

  • Sanchytriomycota · 17 ✖

tax_kingdom 1

  • Fungi · 17 ✖

tax_clade 1

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1877848 1877848 PRJNA630162_P_NODE_143122_length_166_cov_1.290598_g141599_i0 PRJNA630162 143122 166 1.290598 2.14239268 Sanchytrium tribonematis 2020955 Fungi Fungi 278 2.11e-70   NTclustered gi|1216631260|gb|KY652376.1| 2020955 g141599 i0 98.113 9.2289156626506 159 3 96 0 1 159 5046 4888 Sanchytrium tribonematis isolate X-127 haplotype L 28S ribosomal RNA gene, partial sequence blastn 1532 278 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
5231807 5231807 PRJEB64798_P_NODE_59565_length_252_cov_9.729064_g57800_i0 PRJEB64798 59565 252 9.729064 24.51724128 Sanchytrium tribonematis 2020955 Fungi Fungi 257 4.510000000000001e-64   NTclustered gi|1216631258|gb|KY652374.1| 2020955 g57800 i0 85.6 26.4047619047619 250 30 98 6 1 247 8610 8364 Sanchytrium tribonematis isolate X-128 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6654 257 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
5538973 5538973 PRJNA438687_S_NODE_2765_length_268_cov_2.909871_g2675_i0 PRJNA438687 2765 268 2.909871 7.79845428 Amoeboradix gromovi 2109901 Fungi Fungi 392 1.2699999999999999e-104   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g2675 i0 93.233 22.8171641791045 266 18 99 0 1 266 814 1079 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6115 392 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
5716885 5716885 PRJNA641707_P_NODE_210785_length_195_cov_7.821918_g208122_i0 PRJNA641707 210785 195 7.821918 15.2527401 Sanchytrium tribonematis 2020955 Fungi Fungi 182 2.06e-41   NTclustered gi|2713929196|gb|OR365268.2| 2020955 g208122 i0 99.01 30.0871794871795 101 1 95 0 95 195 1422 1522 Sanchytrium tribonematis strain X-137 small subunit ribosomal RNA gene, partial sequence blastn 5867 182 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
7122218 7122218 PRJNA763243_P_NODE_49226_length_256_cov_1.415301_g48880_i0 PRJNA763243 49226 256 1.415301 3.62317056 Amoeboradix gromovi 2109901 Fungi Fungi 409 1.2e-109   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g48880 i0 95.669 6.9453125 254 11 99 0 3 256 4054 4307 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1778 409 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
11605755 11605755 PRJEB64798_P_NODE_160810_length_183_cov_2.723881_g159044_i0 PRJEB64798 160810 183 2.723881 4.98470223 Sanchytrium tribonematis 2020955 Fungi Fungi 226 8.679999999999998e-55   NTclustered gi|2713929196|gb|OR365268.2| 2020955 g159044 i0 98.438 58.1967213114754 128 2 98 0 56 183 847 720 Sanchytrium tribonematis strain X-137 small subunit ribosomal RNA gene, partial sequence blastn 10650 226 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
12882771 12882771 PRJEB64798_P_NODE_53451_length_267_cov_10.073394_g51686_i0 PRJEB64798 53451 267 10.073394 26.89596198 Sanchytrium tribonematis 2020955 Fungi Fungi 394 3.52e-105   NTclustered gi|2713929196|gb|OR365268.2| 2020955 g51686 i0 94.208 87.7191011235955 259 13 97 2 1 258 1606 1349 Sanchytrium tribonematis strain X-137 small subunit ribosomal RNA gene, partial sequence blastn 23421 394 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
13356786 13356786 PRJNA630162_P_NODE_72051_length_211_cov_4.345679_g70528_i0 PRJNA630162 72051 211 4.345679 9.16938269 Amoeboradix gromovi 2109901 Fungi Fungi 357 3.5099999999999996e-94   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g70528 i0 97.156 100.39336492891 211 6 100 0 1 211 1640 1850 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21183 357 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
15590607 15590607 PRJNA1144090_P_NODE_80313_length_281_cov_1.788462_g79778_i0 PRJNA1144090 80313 281 1.788462 5.02557822 Sanchytrium tribonematis 2020955 Fungi Fungi 52.8 0.026   NTclustered gi|2713929196|gb|OR365268.2| 2020955 g79778 i0 100 0.398576512455516 28 0 10 0 125 152 1012 985 Sanchytrium tribonematis strain X-137 small subunit ribosomal RNA gene, partial sequence blastn 112 52.8 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
20051694 20051694 PRJNA944406_P_NODE_95616_length_244_cov_0.900585_g94657_i0 PRJNA944406 95616 244 0.900585 2.1974274 Amoeboradix gromovi 2109901 Fungi Fungi 396 8.829999999999997e-106   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g94657 i0 95.902 7 244 10 100 0 1 244 4305 4062 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1708 396 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
20530308 20530308 PRJEB64798_P_NODE_65557_length_240_cov_2.371728_g63792_i0 PRJEB64798 65557 240 2.371728 5.6921472 Sanchytrium tribonematis 2020955 Fungi Fungi 243 1.19e-59   NTclustered gi|1216631258|gb|KY652374.1| 2020955 g63792 i0 89.894 48.0791666666667 188 19 98 0 7 194 6020 5833 Sanchytrium tribonematis isolate X-128 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11539 243 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
22279257 22279257 PRJNA630162_P_NODE_27298_length_348_cov_3.692308_g25776_i0 PRJNA630162 27298 348 3.692308 12.84923184 Amoeboradix gromovi 2109901 Fungi Fungi 527 4.489999999999998e-145   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g25776 i0 94.477 71.9798850574713 344 15 98 4 1 342 1155 814 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25049 527 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
23080248 23080248 PRJEB64798_P_NODE_228679_length_159_cov_4.372727_g226913_i0 PRJEB64798 228679 159 4.372727 6.95263593 Amoeboradix gromovi 2109901 Fungi Fungi 211 2.05e-50   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g226913 i0 91.558 6.81132075471698 154 11 96 2 2 154 4244 4092 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1083 211 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
24353535 24353535 PRJEB64798_P_NODE_190320_length_170_cov_3.826446_g188554_i0 PRJEB64798 190320 170 3.826446 6.5049582 Sanchytrium tribonematis 2020955 Fungi Fungi 78.7 2.35e-10   NTclustered gi|1216631260|gb|KY652376.1| 2020955 g188554 i0 100 34.3588235294118 42 0 25 0 129 170 3478 3519 Sanchytrium tribonematis isolate X-127 haplotype L 28S ribosomal RNA gene, partial sequence blastn 5841 78.7 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
24353869 24353869 PRJEB64798_P_NODE_212040_length_164_cov_2.991304_g210274_i0 PRJEB64798 212040 164 2.991304 4.90573856 Sanchytrium tribonematis 2020955 Fungi Fungi 270 3.4699999999999992e-68   NTclustered gi|1216631258|gb|KY652374.1| 2020955 g210274 i0 97.484 8.71951219512195 159 3 96 1 6 163 7231 7389 Sanchytrium tribonematis isolate X-128 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1430 270 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis
24828871 24828871 PRJNA630162_P_NODE_73860_length_209_cov_2.268750_g72337_i0 PRJNA630162 73860 209 2.26875 4.7416875 Amoeboradix gromovi 2109901 Fungi Fungi 322 1.26e-83   NTclustered gi|1359934831|gb|MG256970.1| 2109901 g72337 i0 95.098 6.83253588516746 204 10 98 0 5 208 4101 4304 Amoeboradix gromovi strain X-113 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1428 322 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Amoeboradix Amoeboradix gromovi
26267777 26267777 PRJNA737474g_S_NODE_382718_length_245_cov_1.250000_g381424_i0 PRJNA737474 382718 245 1.25 3.0625 Sanchytrium tribonematis 2020955 Fungi Fungi 56.5 0.002   NTclustered gi|2713929196|gb|OR365268.2| 2020955 g381424 i0 100 0.489795918367347 30 0 12 0 24 53 1014 985 Sanchytrium tribonematis strain X-137 small subunit ribosomal RNA gene, partial sequence blastn 120 56.5 1 Eukaryota Opisthokonta Fungi Sanchytriomycota Sanchytriomycetes Sanchytriales Sanchytriaceae Sanchytrium Sanchytrium tribonematis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;