RNAquarium Metadata Server
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contig_metadata

1 row where tax_clade = "sauropsid retroviruses", tax_phylum = "Artverviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

  • Artverviricota · 1 ✖

tax_kingdom 1

tax_clade 1

  • sauropsid retroviruses · 1 ✖

bioproject 1

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33008959 33008959 PRJNA1233465b_S_NODE_124115_length_254_cov_1.380488_g122430_i0 PRJNA1233465 124115 254 1.380488 3.50643952 Viruses 10239 Viruses Viruses 94.7 2.2e-20   NR AAN77285.1 201996 g122430 i0 55.6 1.91338582677165 81 36 95.7 0 248 6 236 316 AAN77285.1 Gag-Pro-Pol protein, partial [Python curtus endogenous retrovirus] diamond 486 94.7 1 Viruses sauropsid retroviruses Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Python curtus endogenous retrovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;