RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where tax_clade = "non-mammal papillomaviruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • non-mammal papillomaviruses · 1 ✖

bioproject 1

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13009653 13009653 PRJNA1120060_P_NODE_2817271_length_245_cov_4.860465_g2799185_i0 PRJNA1120060 2817271 245 4.860465 11.90813925 Melanogrammus aeglefinus-associated papillomavirus 1 2683333 Viruses Viruses 52.8 0.022   NTclustered gi|2069601150|gb|MH617143.2| 2683333 g2799185 i0 96.774 0.126530612244898 31 1 13 0 144 174 3161 3191 MAG: Melanogrammus aeglefinus-associated papillomavirus 1 isolate ctce22, complete genome blastn 31 52.8 1 Viruses non-mammal papillomaviruses Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Melanogrammus aeglefinus-associated papillomavirus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;