RNAquarium Metadata Server
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contig_metadata

34 rows where tax_clade = "RNA satellites" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 34 ✖

tax_clade 1

  • RNA satellites · 34 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1718502 1718502 PRJNA473201_P_NODE_3002_length_1144_cov_13.519141_g2576_i0 PRJNA473201 3002 1144 13.519141 154.65897304 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 1295 0   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g2576 i0 91.272 0.831293706293706 951 81 83 2 2 951 6 955 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 951 1295 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
2279325 2279325 PRJNA1022587_S_NODE_22_length_988_cov_3.144262_g20_i0 PRJNA1022587 22 988 3.144262 31.06530856 Viruses 10239 Viruses Viruses 867 0   NTclustered gi|1408257600|ref|NC_037663.1| 2219109 g20 i0 97.624 5.1497975708502 505 12 51 0 3 507 3905 3401 Botrytis cinerea hypovirus 1 satellite-like RNA, complete genome blastn 5088 872 0.994266055045872 Viruses RNA satellites             Botrytis cinerea hypovirus 1 satellite-like RNA
6000547 6000547 PRJNA922057_P_NODE_1425_length_380_cov_2.508143_g1382_i0 PRJNA922057 1425 380 2.508143 9.5309434 Bamboo mosaic virus satellite RNA 190811 Viruses Viruses 662 0   NTclustered gi|1242862488|dbj|LC223294.1| 190811 g1382 i0 98.404 98.9421052631579 376 6 99 0 5 380 835 460 Bamboo mosaic virus satellite RNA genomic RNA, complete sequence, clone: Bvu_a-15 blastn 37598 662 1 Viruses RNA satellites             Bamboo mosaic virus satellite RNA
6107317 6107317 PRJNA1022587_S_NODE_65_length_691_cov_4.220065_g63_i0 PRJNA1022587 65 691 4.220065 29.16064915 Viruses 10239 Viruses Viruses 1184 0   NTclustered gi|1408257600|ref|NC_037663.1| 2219109 g63 i0 97.678 8.01302460202605 689 16 99 0 3 691 3905 3217 Botrytis cinerea hypovirus 1 satellite-like RNA, complete genome blastn 5537 1190 0.994957983193277 Viruses RNA satellites             Botrytis cinerea hypovirus 1 satellite-like RNA
8085877 8085877 PRJNA437204_P_NODE_44427_length_313_cov_1.283333_g44128_i0 PRJNA437204 44427 313 1.283333 4.01683229 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 278 4.44e-70   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g44128 i0 85.036 0.875399361022364 274 39 87 2 1 273 538 810 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 274 278 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
9371426 9371426 PRJNA473201_P_NODE_3008_length_1142_cov_12.420019_g2581_i0 PRJNA473201 3008 1142 12.420019 141.83661698 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 1290 0   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g2581 i0 91.176 0.833625218914186 952 80 83 4 2 951 6 955 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 952 1290 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
10731967 10731967 PRJNA556992_P_NODE_363569_length_280_cov_3.864734_g361380_i0 PRJNA556992 363569 280 3.864734 10.8212552 Cereal yellow dwarf virus-RPV satellite RNA 191032 Viruses Viruses 58.4 5.55e-4   NTclustered gi|323236|gb|M63666.1|BYDSATRNA 191032 g361380 i0 86.538 1.825 52 7 19 0 3 54 196 247 Cereal yellow dwarf virus-RPA satellite RNA blastn 511 58.4 1 Viruses RNA satellites             Cereal yellow dwarf virus-RPV satellite RNA
13197300 13197300 PRJNA473201_P_NODE_3411_length_1083_cov_14.568317_g2948_i0 PRJNA473201 3411 1083 14.568317 157.77487311 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 708 0   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g2948 i0 83.462 0.797783933518006 780 109 71 13 20 793 34 799 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 864 708 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
14158112 14158112 PRJEB64798_P_NODE_85432_length_213_cov_3.304878_g83666_i0 PRJEB64798 85432 213 3.304878 7.03939014 Solanum nodiflorum mottle virus satellite RNA 195061 Viruses Viruses 78.7 3.09e-10   NTclustered gi|332194|gb|J02386.1|MSNR2 195061 g83666 i0 100 0.981220657276995 42 0 20 0 4 45 49 90 Solanum nodiflorum mottle virus satellite RNA blastn 209 78.7 1 Viruses RNA satellites             Solanum nodiflorum mottle virus satellite RNA
14955941 14955941 PRJNA946307_P_NODE_86092_length_190_cov_2.617021_g85218_i0 PRJNA946307 86092 190 2.617021 4.9723399 Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA 2822894 Viruses Viruses 89.8 1.24e-13   NTclustered gi|2111886850|gb|MW454886.1| 2822894 g85218 i0 85.714 0.442105263157895 84 12 44 0 84 167 118 201 Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA isolate GB375-3 hypothetical protein gene, complete cds blastn 84 89.8 1 Viruses RNA satellites             Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA
15160469 15160469 PRJNA564013_P_NODE_278772_length_239_cov_6.505618_g275920_i0 PRJNA564013 278772 239 6.505618 15.54842702 Viruses 10239 Viruses Viruses 372 1.45e-98   NTclustered gi|1399050144|gb|MG554637.1| 2219110 g275920 i0 99.034 10.9665271966527 207 2 87 0 6 212 1378 1172 Botrytis cinerea hypovirus 1 satellite-like RNA-S, complete genome blastn 2621 375 0.992 Viruses RNA satellites             Botrytis cinerea hypovirus 1 satellite-like RNA-S
16999846 16999846 PRJNA421571_P_NODE_25434_length_671_cov_4.623746_g22961_i0 PRJNA421571 25434 671 4.623746 31.02533566 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 488 4.2999999999999986e-133   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g22961 i0 83.554 0.788375558867362 529 80 78 6 1 525 430 955 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 529 488 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
17020959 17020959 PRJNA473201_P_NODE_2894_length_1160_cov_14.457222_g2481_i0 PRJNA473201 2894 1160 14.457222 167.7037752 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 1408 0   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g2481 i0 90.26 0.929310344827586 1078 104 93 1 2 1079 6 1082 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 1078 1408 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
18274478 18274478 PRJNA421571_P_NODE_36495_length_503_cov_1.195349_g33952_i0 PRJNA421571 36495 503 1.195349 6.01260547 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 104 1.34e-17   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g33952 i0 95.385 0.129224652087475 65 3 13 0 439 503 402 338 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 65 104 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
18733383 18733383 PRJNA902848_P_NODE_14415_length_251_cov_0.876404_g14365_i0 PRJNA902848 14415 251 0.876404 2.19977404 Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA 2822894 Viruses Viruses 108 4.79e-19   NTclustered gi|2111886850|gb|MW454886.1| 2822894 g14365 i0 100 0.231075697211155 58 0 23 0 194 251 214 157 Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA isolate GB375-3 hypothetical protein gene, complete cds blastn 58 108 1 Viruses RNA satellites             Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA
20601782 20601782 PRJNA1095825_P_NODE_238757_length_251_cov_0.865169_g235694_i0 PRJNA1095825 238757 251 0.865169 2.17157419 Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA 2822894 Viruses Viruses 54.7 0.006   NTclustered gi|2111886850|gb|MW454886.1| 2822894 g235694 i0 100 0.115537848605578 29 0 12 0 1 29 60 88 Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA isolate GB375-3 hypothetical protein gene, complete cds blastn 29 54.7 1 Viruses RNA satellites             Sclerotinia sclerotiorum hypovirus 7 satellite-like RNA
20845356 20845356 PRJNA473201_P_NODE_3417_length_1082_cov_11.482656_g2954_i0 PRJNA473201 3417 1082 11.482656 124.24233792 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 1476 0   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g2954 i0 91.381 0.997227356746765 1079 91 99 1 3 1081 1082 6 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 1079 1476 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
22120205 22120205 PRJNA473201_P_NODE_3398_length_1085_cov_63.624506_g2939_i0 PRJNA473201 3398 1085 63.624506 690.3258901 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 691 0   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g2939 i0 83.077 7.14285714285714 780 112 71 12 290 1063 799 34 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 7750 691 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
22288849 22288849 PRJNA641707_P_NODE_143998_length_240_cov_10.979058_g141335_i0 PRJNA641707 143998 240 10.979058 26.3497392 Pea enation mosaic virus satellite RNA 193119 Viruses Viruses 183 7.339999999999998e-42   NTclustered gi|2329449768|gb|OP357955.1| 193119 g141335 i0 100 9.41666666666667 99 0 79 0 1 99 266 168 Pea enation mosaic virus satellite RNA isolate DSMZ PV-1362, complete sequence blastn 2260 183 1 Viruses RNA satellites             Pea enation mosaic virus satellite RNA
22575922 22575922 PRJNA923277_P_NODE_358_length_826_cov_29.632138_g278_i0 PRJNA923277 358 826 29.632138 244.76145988 Bamboo mosaic virus satellite RNA 190811 Viruses Viruses 1338 0   NTclustered gi|37782359|gb|AY205230.1| 190811 g278 i0 95.995 99.7506053268765 824 32 99 1 1 824 14 836 Satellite RNA of bamboo mosaic potexvirus isolate BSL2 P20 protein gene, complete cds blastn 82394 1338 1 Viruses RNA satellites             Bamboo mosaic virus satellite RNA
22680293 22680293 PRJNA1020854_S_NODE_7038_length_591_cov_549.135231_g4457_i0 PRJNA1020854 7038 591 549.135231 3245.38921521 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 159 1.98e-43   NR NP_624321.1 99930 g4457 i0 68.1 0.573604060913706 113 34 57.4 1 68 406 292 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 339 159 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
24649751 24649751 PRJNA421571_P_NODE_57140_length_351_cov_4.636691_g54591_i0 PRJNA421571 57140 351 4.636691 16.27478541 Peony yellowing associated secovirus satellite RNA 2800989 Viruses Viruses 359 1.75e-94   NTclustered gi|1898324217|gb|MN259157.1| 2800989 g54591 i0 89.041 0.831908831908832 292 29 83 2 2 293 360 72 Peony yellowing associated secovirus satellite RNA strain BJ 31 kDa protein gene, complete cds blastn 292 359 1 Viruses RNA satellites             Peony yellowing associated secovirus satellite RNA
25115933 25115933 PRJNA906294_P_NODE_91240_length_445_cov_8.137097_g87126_i0 PRJNA906294 91240 445 8.137097 36.21008165 Cnidiuim virus associated satellite 3133206 Viruses Viruses 337 1.0599999999999996e-87   NTclustered gi|2698750354|gb|PP486167.1| 3133206 g87126 i0 80.574 5.92808988764045 453 75 99 12 2 444 5 454 Cnidiuim virus associated satellite isolate Socheon-myeon Bonghwa 31 kDa protein gene, complete cds blastn 2638 337 1 Viruses RNA satellites             Cnidiuim virus associated satellite
27434161 27434161 PRJNA841653_P_NODE_13343_length_452_cov_0.970976_g12672_i0 PRJNA841653 13343 452 0.970976 4.38881152 Rhodosporidiobolus odoratus dsRNA Virus 1 satellite 2787046 Viruses Viruses 67.4 3e-11   NR QPH36702.1 2787046 g12672 i0 50.7 0.484513274336283 73 31 48.5 2 364 146 49 116 QPH36702.1 Satellite-like RNA [Rhodosporidiobolus odoratus dsRNA Virus 1 satellite] diamond 219 67.4 1 Viruses RNA satellites             Rhodosporidiobolus odoratus dsRNA Virus 1 satellite
28315329 28315329 PRJNA715462_P_NODE_4346_length_1210_cov_15.648197_g3819_i0 PRJNA715462 4346 1210 15.648197 189.3431837 Green Sichuan pepper nepovirus satellite 2851655 Viruses Viruses 132 5.73e-31   NR QWY93777.1 2851655 g3819 i0 34.7 1.70578512396694 331 176 77.1 16 1073 141 55 365 QWY93777.1 hypothetical protein [Green Sichuan pepper nepovirus satellite] diamond 2064 132 1 Viruses RNA satellites             Green Sichuan pepper nepovirus satellite
28320804 28320804 PRJNA971593_P_NODE_12146_length_347_cov_0.923358_g11997_i0 PRJNA971593 12146 347 0.923358 3.20405226 Cnidiuim virus associated satellite 3133206 Viruses Viruses 147 3.15e-41   NR WXB65927.1 3133206 g11997 i0 77.2 0.873198847262248 101 22 87.3 1 45 347 8 107 WXB65927.1 31 kDa protein [Cnidiuim virus associated satellite] diamond 303 147 1 Viruses RNA satellites             Cnidiuim virus associated satellite
28352384 28352384 PRJNA971593_P_NODE_19626_length_268_cov_1.543590_g19477_i0 PRJNA971593 19626 268 1.54359 4.1368212 Cnidiuim virus associated satellite 3133206 Viruses Viruses 125 2.68e-33   NR WXB65927.1 3133206 g19477 i0 70 1.00746268656716 90 24 98.5 2 3 266 121 209 WXB65927.1 31 kDa protein [Cnidiuim virus associated satellite] diamond 270 125 1 Viruses RNA satellites             Cnidiuim virus associated satellite
29676554 29676554 PRJNA906294_P_NODE_121810_length_359_cov_3.653846_g117694_i0 PRJNA906294 121810 359 3.653846 13.11730714 Cnidiuim virus associated satellite 3133206 Viruses Viruses 174 1.48e-51   NR WXB65927.1 3133206 g117694 i0 81.4 0.81058495821727 97 18 81.1 0 358 68 181 277 WXB65927.1 31 kDa protein [Cnidiuim virus associated satellite] diamond 291 174 1 Viruses RNA satellites             Cnidiuim virus associated satellite
30510193 30510193 PRJNA1112809_P_NODE_159213_length_255_cov_1.445055_g155938_i0 PRJNA1112809 159213 255 1.445055 3.68489025 Strawberry latent ringspot virus satellite RNA 195062 Viruses Viruses 75.9 3.81e-14   NR WIU81415.1 195062 g155938 i0 56.1 0.964705882352941 82 32 92.9 2 15 251 13 93 WIU81415.1 hypothetical protein [Strawberry latent ringspot virus satellite RNA] diamond 246 75.9 1 Viruses RNA satellites             Strawberry latent ringspot virus satellite RNA
30745459 30745459 PRJNA680334_S_NODE_5214_length_381_cov_8.295977_g4729_i0 PRJNA680334 5214 381 8.295977 31.60767237 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 112 2.11e-26   NR NP_624321.1 99930 g4729 i0 73.6 0.566929133858268 72 17 55.1 1 2 211 331 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 216 112 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
31063212 31063212 PRJNA715462_P_NODE_4435_length_1193_cov_8.111607_g3904_i0 PRJNA715462 4435 1193 8.111607 96.77147151 Green Sichuan pepper nepovirus satellite 2851655 Viruses Viruses 131 9.82e-31   NR QWY93767.1 2851655 g3904 i0 31.9 2.62782900251467 357 204 85 14 1137 124 28 364 QWY93767.1 hypothetical protein [Green Sichuan pepper nepovirus satellite] diamond 3135 131 1 Viruses RNA satellites             Green Sichuan pepper nepovirus satellite
32034062 32034062 PRJNA285816_S_NODE_838_length_686_cov_3.149137_g772_i0 PRJNA285816 838 686 3.149137 21.60307982 Bamboo mosaic virus satellite RNA 190811 Viruses Viruses 107 1.28e-25   NR AJO26629.1 190811 g772 i0 51.1 0.787172011661808 90 44 39.4 0 499 230 25 114 AJO26629.1 P20 protein, partial [Bamboo mosaic virus satellite RNA] diamond 540 107 1 Viruses RNA satellites             Bamboo mosaic virus satellite RNA
32908151 32908151 PRJEB14175_P_NODE_103129_length_351_cov_2.634483_g100863_i0 PRJEB14175 103129 351 2.634483 9.24703533 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 48.9 7.98e-4   NR NP_624321.1 99930 g100863 i0 34.4 0.82051282051282 96 60 81.2 3 338 54 141 234 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 288 48.9 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
33062258 33062258 PRJEB14175_P_NODE_141493_length_287_cov_8.283186_g139226_i0 PRJEB14175 141493 287 8.283186 23.77274382 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 48.1 7.58e-4   NR NP_624321.1 99930 g139226 i0 66.7 0.313588850174216 30 10 31.4 0 276 187 373 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 90 48.1 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;