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contig_metadata

27 rows where tax_clade = "Ice core isolates"

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tax_superkingdom 1

tax_clade 1

  • Ice core isolates · 27 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3665512 3665512 PRJNA526570_S_NODE_3683_length_151_cov_12.745902_g3655_i0 PRJNA526570 3683 151 12.745902 19.24631202 root 1 Root_unresolved Root_unresolved 279 5.19e-71   NTclustered gi|3264665|gb|AF069824.1| 77946 g3655 i0 100 100 151 0 100 0 1 151 11 161 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15100 279 1 Eukaryota Ice core isolates             Ice core clone 147-15
3720887 3720887 PRJNA680334_S_NODE_106043_length_150_cov_18.726496_g105557_i0 PRJNA680334 106043 150 18.726496 28.089744 root 1 Root_unresolved Root_unresolved 278 1.85e-70   NTclustered gi|3264665|gb|AF069824.1| 77946 g105557 i0 100 100 150 0 100 0 1 150 13 162 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15000 278 1 Eukaryota Ice core isolates             Ice core clone 147-15
4485530 4485530 PRJNA681861_P_NODE_36364_length_186_cov_89.299363_g34264_i0 PRJNA681861 36364 186 89.299363 166.09681518 Ice core clone 105-11 77950 Root_unresolved Root_unresolved 150 5.48e-32   NTclustered gi|3264669|gb|AF069828.1| 77950 g34264 i0 98.81 80.7311827956989 84 1 73 0 53 136 145 62 Ice core clone 105-11 18S ribosomal RNA gene, partial sequence blastn 15016 150 1 Eukaryota Ice core isolates             Ice core clone 105-11
4963906 4963906 PRJNA565778_S_NODE_35464_length_182_cov_335.137931_g35168_i0 PRJNA565778 35464 182 335.137931 609.95103442 root 1 Root_unresolved Root_unresolved 270 3.93e-68   NTclustered gi|3264665|gb|AF069824.1| 77946 g35168 i0 100 80.2197802197802 146 0 80 0 37 182 17 162 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 14600 270 1 Eukaryota Ice core isolates             Ice core clone 147-15
6309994 6309994 PRJNA766854_P_NODE_1525_length_335_cov_13.803922_g1400_i0 PRJNA766854 1525 335 13.803922 46.2431387 root 1 Root_unresolved Root_unresolved 289 2.2099999999999996e-73   NTclustered gi|3264665|gb|AF069824.1| 77946 g1400 i0 100 46.7014925373134 156 0 47 0 1 156 10 165 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15645 289 1 Eukaryota Ice core isolates             Ice core clone 147-15
7434591 7434591 PRJNA242641_S_NODE_2366_length_152_cov_5.845528_g2338_i0 PRJNA242641 2366 152 5.845528 8.88520256 root 1 Root_unresolved Root_unresolved 281 1.46e-71   NTclustered gi|3264665|gb|AF069824.1| 77946 g2338 i0 100 100 152 0 100 0 1 152 10 161 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15200 281 1 Eukaryota Ice core isolates             Ice core clone 147-15
11292080 11292080 PRJNA432257_S_NODE_91729_length_182_cov_1439.186207_g91348_i0 PRJNA432257 91729 182 1439.186207 2619.31889674 root 1 Root_unresolved Root_unresolved 250 5.1099999999999995e-62   NTclustered gi|3264665|gb|AF069824.1| 77946 g91348 i0 100 74.1813186813187 135 0 74 0 7 141 151 17 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 13501 252 0.992063492063492 Eukaryota Ice core isolates             Ice core clone 147-15
12474241 12474241 PRJEB673_P_NODE_8950_length_221_cov_2.440860_g8601_i0 PRJEB673 8950 221 2.44086 5.3943006 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 409 1.0100000000000001e-109   NTclustered gi|2174921264|emb|LR997963.1| 77947 g8601 i0 100 98.7692307692308 221 0 100 0 1 221 230 10 Ice core clone 147-5 partial 18S rRNA gene, isolate EW OTU5453_S2, clone M01452:264:000000000-D5YNG:1:1102:25513:24554 blastn 21828 409 1 Eukaryota Ice core isolates             Ice core clone 147-5
12658593 12658593 PRJNA691756_S_NODE_3990_length_158_cov_47.503876_g3974_i0 PRJNA691756 3990 158 47.503876 75.05612408 root 1 Root_unresolved Root_unresolved 250 4.31e-62   NTclustered gi|3264665|gb|AF069824.1| 77946 g3974 i0 100 85.4493670886076 135 0 85 0 1 135 17 151 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 13501 252 0.992063492063492 Eukaryota Ice core isolates             Ice core clone 147-15
12685615 12685615 PRJNA766854_P_NODE_2130_length_292_cov_16.228137_g2004_i0 PRJNA766854 2130 292 16.228137 47.38616004 root 1 Root_unresolved Root_unresolved 289 1.8899999999999996e-73   NTclustered gi|3264665|gb|AF069824.1| 77946 g2004 i0 100 64.6712328767123 156 0 70 0 1 156 10 165 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 18884 289 1 Eukaryota Ice core isolates             Ice core clone 147-15
13985546 13985546 PRJNA848822_P_NODE_14311_length_152_cov_9.682927_g13761_i0 PRJNA848822 14311 152 9.682927 14.71804904 root 1 Root_unresolved Root_unresolved 276 6.770000000000001e-70   NTclustered gi|3264665|gb|AF069824.1| 77946 g13761 i0 99.342 100 152 1 100 0 1 152 19 170 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15200 276 1 Eukaryota Ice core isolates             Ice core clone 147-15
16312270 16312270 PRJNA1047551_S_NODE_13053_length_152_cov_9.863248_g12926_i0 PRJNA1047551 13053 152 9.863248 14.99213696 root 1 Root_unresolved Root_unresolved 246 5.31e-61   NTclustered gi|3264665|gb|AF069824.1| 77946 g12926 i0 100 87.5 133 0 88 0 20 152 30 162 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 13300 246 1 Eukaryota Ice core isolates             Ice core clone 147-15
16436269 16436269 PRJNA565416_S_NODE_5133_length_150_cov_2.363636_g5091_i0 PRJNA565416 5133 150 2.363636 3.545454 root 1 Root_unresolved Root_unresolved 255 8.680000000000001e-64   NTclustered gi|3264665|gb|AF069824.1| 77946 g5091 i0 97.333 100 150 4 100 0 1 150 13 162 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15000 255 1 Eukaryota Ice core isolates             Ice core clone 147-15
16452702 16452702 PRJNA615351_P_NODE_125733_length_235_cov_106.190000_g111633_i0 PRJNA615351 125733 235 106.19 249.5465 root 1 Root_unresolved Root_unresolved 418 1.8e-112   NTclustered gi|3264665|gb|AF069824.1| 77946 g111633 i0 99.563 97.4468085106383 229 1 97 0 3 231 7 235 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 22900 418 1 Eukaryota Ice core isolates             Ice core clone 147-15
16603419 16603419 PRJEB29441_P_NODE_33234_length_181_cov_2.575758_g32793_i0 PRJEB29441 33234 181 2.575758 4.66212198 Ice core clone 105-7 77952 Root_unresolved Root_unresolved 313 6.39e-81   NTclustered gi|3264671|gb|AF069830.1| 77952 g32793 i0 97.79 107.585635359116 181 4 100 0 1 181 39 219 Ice core clone 105-7 18S ribosomal RNA gene, partial sequence blastn 19473 313 1 Eukaryota Ice core isolates             Ice core clone 105-7
18852986 18852986 PRJNA1008049_S_NODE_3995_length_158_cov_47.503876_g3977_i0 PRJNA1008049 3995 158 47.503876 75.05612408 root 1 Root_unresolved Root_unresolved 250 4.31e-62   NTclustered gi|3264665|gb|AF069824.1| 77946 g3977 i0 100 85.4493670886076 135 0 85 0 1 135 17 151 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 13501 252 0.992063492063492 Eukaryota Ice core isolates             Ice core clone 147-15
21473622 21473622 PRJNA352869_P_NODE_12377_length_156_cov_16.952756_g11978_i0 PRJNA352869 12377 156 16.952756 26.44629936 root 1 Root_unresolved Root_unresolved 278 1.95e-70   NTclustered gi|3264665|gb|AF069824.1| 77946 g11978 i0 99.346 98.0961538461538 153 1 98 0 1 153 10 162 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15303 279 0.996415770609319 Eukaryota Ice core isolates             Ice core clone 147-15
22680107 22680107 PRJNA1020854_S_NODE_26998_length_201_cov_3293.261628_g24234_i0 PRJNA1020854 26998 201 3293.261628 6619.45587228 root 1 Root_unresolved Root_unresolved 250 5.78e-62   NTclustered gi|3264665|gb|AF069824.1| 77946 g24234 i0 100 67.1691542288557 135 0 67 0 55 189 17 151 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 13501 252 0.992063492063492 Eukaryota Ice core isolates             Ice core clone 147-15
24034614 24034614 PRJNA414036_P_NODE_31319_length_267_cov_8.823276_g29583_i0 PRJNA414036 31319 267 8.823276 23.55814692 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 255 1.73e-63   NTclustered gi|2174921264|emb|LR997963.1| 77947 g29583 i0 93.182 75.0786516853933 176 9 66 2 10 184 209 36 Ice core clone 147-5 partial 18S rRNA gene, isolate EW OTU5453_S2, clone M01452:264:000000000-D5YNG:1:1102:25513:24554 blastn 20046 255 1 Eukaryota Ice core isolates             Ice core clone 147-5
24118004 24118004 PRJNA674048_P_NODE_30459_length_164_cov_4.156522_g30256_i0 PRJNA674048 30459 164 4.156522 6.81669608 root 1 Root_unresolved Root_unresolved 303 3.42e-78   NTclustered gi|3264665|gb|AF069824.1| 77946 g30256 i0 100 100 164 0 100 0 1 164 3 166 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 16400 303 1 Eukaryota Ice core isolates             Ice core clone 147-15
24197532 24197532 PRJNA900999_S_NODE_8379_length_159_cov_67.661538_g8323_i0 PRJNA900999 8379 159 67.661538 107.58184542 root 1 Root_unresolved Root_unresolved 289 9.22e-74   NTclustered gi|3264665|gb|AF069824.1| 77946 g8323 i0 99.371 100 159 1 100 0 1 159 159 1 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15900 289 1 Eukaryota Ice core isolates             Ice core clone 147-15
25307810 25307810 PRJNA407368_S_NODE_10360_length_152_cov_68.227642_g10258_i0 PRJNA407368 10360 152 68.227642 103.70601584 root 1 Root_unresolved Root_unresolved 274 2.44e-69   NTclustered gi|3264665|gb|AF069824.1| 77946 g10258 i0 99.338 99.3421052631579 151 1 99 0 2 152 161 11 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15100 274 1 Eukaryota Ice core isolates             Ice core clone 147-15
25370392 25370392 PRJNA604753_S_NODE_4680_length_161_cov_5.742424_g4657_i0 PRJNA604753 4680 161 5.742424 9.24530264 root 1 Root_unresolved Root_unresolved 261 2.04e-65   NTclustered gi|3264665|gb|AF069824.1| 77946 g4657 i0 100 87.6024844720497 141 0 88 0 21 161 18 158 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 14104 263 0.992395437262357 Eukaryota Ice core isolates             Ice core clone 147-15
25761102 25761102 PRJNA399711_S_NODE_81722_length_166_cov_19.085271_g81580_i0 PRJNA399711 81722 166 19.085271 31.68154986 root 1 Root_unresolved Root_unresolved 254 3.55e-63   NTclustered gi|3264665|gb|AF069824.1| 77946 g81580 i0 98.601 86.1506024096386 143 2 86 0 5 147 9 151 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 14301 255 0.996078431372549 Eukaryota Ice core isolates             Ice core clone 147-15
25888768 25888768 PRJEB7799f_S_NODE_6355_length_159_cov_2.338710_g6339_i0 PRJEB7799 6355 159 2.33871 3.7185489 root 1 Root_unresolved Root_unresolved 289 9.22e-74   NTclustered gi|3264665|gb|AF069824.1| 77946 g6339 i0 99.371 100 159 1 100 0 1 159 17 175 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 15900 289 1 Eukaryota Ice core isolates             Ice core clone 147-15
25889609 25889609 PRJEB8827e_S_NODE_41715_length_154_cov_2.731092_g41687_i0 PRJEB8827 41715 154 2.731092 4.20588168 root 1 Root_unresolved Root_unresolved 246 5.4e-61   NTclustered gi|3264665|gb|AF069824.1| 77946 g41687 i0 100 86.3701298701299 133 0 86 0 22 154 151 19 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 13301 248 0.991935483870968 Eukaryota Ice core isolates             Ice core clone 147-15
26438717 26438717 PRJNA1233465e_S_NODE_44775_length_269_cov_10.363636_g43465_i0 PRJNA1233465 44775 269 10.363636 27.87818084 root 1 Root_unresolved Root_unresolved 272 1.74e-68   NTclustered gi|3264665|gb|AF069824.1| 77946 g43465 i0 100 98.3754646840149 147 0 55 0 1 147 163 17 Ice core clone 147-15 18S ribosomal RNA gene, partial sequence blastn 26463 272 1 Eukaryota Ice core isolates             Ice core clone 147-15

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;