RNAquarium Metadata Server
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contig_metadata

2 rows where tax_clade = "Candidatus Thermofonsia Clade 1" and tax_kingdom = "Bacillati"

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bioproject 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bacillati · 2 ✖

tax_clade 1

  • Candidatus Thermofonsia Clade 1 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31246238 31246238 PRJNA515078_P_NODE_18695_length_201_cov_1.048780_g18462_i0 PRJNA515078 18695 201 1.04878 2.1080478 Candidatus Thermofonsia Clade 1 bacterium 2364210 Bacteria Bacteria 53.9 2.35e-6   NR PJF37383.1 2364210 g18462 i0 46.9 2.19402985074627 49 26 73.1 0 194 48 10 58 PJF37383.1 MAG: acyl-CoA dehydrogenase [Candidatus Thermofonsia Clade 1 bacterium] diamond 441 53.9 1 Bacteria Candidatus Thermofonsia Clade 1 Bacillati Chloroflexota Candidatus Thermofontia       Candidatus Thermofonsia Clade 1 bacterium
32105677 32105677 PRJNA690592_S_NODE_62778_length_398_cov_1.960000_g61764_i0 PRJNA690592 62778 398 1.96 7.8008 Candidatus Thermofonsia Clade 1 bacterium 2364210 Bacteria Bacteria 45.1 0.0255   NR PJF42615.1 2364210 g61764 i0 34.6 0.391959798994975 52 34 39.2 0 169 324 239 290 PJF42615.1 MAG: alkaline phosphatase [Candidatus Thermofonsia Clade 1 bacterium] diamond 156 45.1 1 Bacteria Candidatus Thermofonsia Clade 1 Bacillati Chloroflexota Candidatus Thermofontia       Candidatus Thermofonsia Clade 1 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;