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contig_metadata

21 rows where tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Beckwithiibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Beckwithiibacteriota · 21 ✖

tax_clade 1

  • Bacteria candidate phyla · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5705192 5705192 PRJNA630162_P_NODE_129285_length_170_cov_1.123967_g127762_i0 PRJNA630162 129285 170 1.123967 1.9107439 Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16 1618372 Bacteria Bacteria 106 1.08e-18   NTclustered gi|837349576|gb|CP011210.1| 1618372 g127762 i0 86.735 118.352941176471 98 10 56 2 33 127 159342 159245 MAG: Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16 chromosome, complete genome blastn 20120 106 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
14155661 14155661 PRJEB64798_P_NODE_160172_length_183_cov_5.194030_g158406_i0 PRJEB64798 160172 183 5.19403 9.5050749 Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16 1618372 Bacteria Bacteria 145 2.5e-30   NTclustered gi|837349576|gb|CP011210.1| 1618372 g158406 i0 82.53 104.431693989071 166 27 90 2 12 176 161670 161834 MAG: Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16 chromosome, complete genome blastn 19111 145 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
19818837 19818837 PRJNA704949_P_NODE_1745336_length_181_cov_2.363636_g1729997_i0 PRJNA704949 1745336 181 2.363636 4.27818116 Bacillati 1783272 Bacteria Bacteria 93.2 6.890000000000001e-21   NR PIP52920.1 1974497 g1729997 i0 76.4 10.1933701657459 55 13 91.2 0 180 16 196 250 PIP52920.1 MAG: GDP-mannose 4,6-dehydratase [Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_34_8] diamond 1845 93.2 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_34_8
23971782 23971782 PRJNA1095825_P_NODE_246339_length_249_cov_1.750000_g243276_i0 PRJNA1095825 246339 249 1.75 4.3575 Candidatus Beckwithbacteria bacterium 2053519 Bacteria Bacteria 66.6 1.47e-10   NR NMB56310.1 2053519 g243276 i0 52.1 0.578313253012048 48 23 57.8 0 248 105 403 450 NMB56310.1 hypothetical protein [Candidatus Beckwithbacteria bacterium] diamond 144 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium
26742524 26742524 PRJNA1144090_P_NODE_32781_length_457_cov_2.614583_g32246_i0 PRJNA1144090 32781 457 2.614583 11.94864431 Pseudomonadati 3379134 Bacteria Bacteria 79.7 4.62e-14   NR PIS09315.1 1974495 g32246 i0 35.7 5.63238512035011 143 91 93.2 1 457 32 467 609 PIS09315.1 MAG: molecular chaperone DnaK [Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10] diamond 2574 79.7 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10
26829226 26829226 PRJNA688655_P_NODE_4981_length_295_cov_1.427928_g4916_i0 PRJNA688655 4981 295 1.427928 4.2123876 Candidatus Beckwithbacteria bacterium CG23_combo_of_CG 2053519 Bacteria Bacteria 53.5 9.08e-6   NR PIP52731.1 1974497 g4916 i0 40.6 0.701694915254237 69 41 70.2 0 77 283 1 69 PIP52731.1 MAG: hypothetical protein COX08_04830 [Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_34_8] diamond 207 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_34_8
28041913 28041913 PRJNA743294_P_NODE_41145_length_265_cov_3.890625_g40689_i0 PRJNA743294 41145 265 3.890625 10.31015625 Bacteria 2 Bacteria Bacteria 85.9 1.52e-17   NR NMC36426.1 2053519 g40689 i0 47 1.84528301886792 83 42 91.7 1 261 19 243 325 NMC36426.1 hypothetical protein [Candidatus Beckwithbacteria bacterium] diamond 489 86.7 0.990772779700115 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium
28562044 28562044 PRJNA533114_P_NODE_110467_length_245_cov_0.895349_g110215_i0 PRJNA533114 110467 245 0.895349 2.19360505 Candidatus Beckwithbacteria bacterium CG2_3 2053519 Bacteria Bacteria 70.9 3.11e-12   NR OIP03273.1 1805035 g110215 i0 46.8 3.68571428571429 79 36 96.7 2 7 243 119 191 OIP03273.1 MAG: hypothetical protein AUK18_02295 [Candidatus Beckwithbacteria bacterium CG2_30_44_31] diamond 903 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG2_30_44_31
28986417 28986417 PRJNA1195374_P_NODE_14368_length_595_cov_1.224138_g14030_i0 PRJNA1195374 14368 595 1.224138 7.2836211 Bacteria 2 Bacteria Bacteria 65.5 1.47e-8   NR AKM78923.1 1618372 g14030 i0 32.7 6.9781512605042 171 103 81.7 5 575 90 68 235 AKM78923.1 MAG: P-type ATPase, translocating [Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16] diamond 4152 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
29347714 29347714 PRJNA217180_P_NODE_15449_length_161_cov_0.910714_g15349_i0 PRJNA217180 15449 161 0.910714 1.46624954 Candidatus Beckwithbacteria bacterium RBG_13_35_6 1797456 Bacteria Bacteria 83.6 5.83e-19   NR OGD52714.1 1797456 g15349 i0 70.6 0.950310559006211 51 15 95 0 153 1 71 121 OGD52714.1 MAG: cupin [Candidatus Beckwithbacteria bacterium RBG_13_35_6] diamond 153 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium RBG_13_35_6
29502050 29502050 PRJNA1148190_P_NODE_126610_length_468_cov_3.000000_g115447_i0 PRJNA1148190 126610 468 3 14.04 Candidatus Beckwithbacteria bacterium 2053519 Bacteria Bacteria 87 3.69e-17   NR NMC36624.1 2053519 g115447 i0 53.1 0.519230769230769 81 38 51.9 0 3 245 203 283 NMC36624.1 glycosyltransferase family 2 protein [Candidatus Beckwithbacteria bacterium] diamond 243 87 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium
29534904 29534904 PRJNA1148190_P_NODE_7630_length_4057_cov_4.899096_g3333_i1 PRJNA1148190 7630 4057 4.899096 198.75632472 Candidatus Beckwithbacteria bacterium CG1 2053519 Bacteria Bacteria 80.5 4.21e-11   NR PIS09646.1 1974495 g3333 i1 42.2 0.255854079368992 147 72 10.3 8 3617 3201 114 255 PIS09646.1 MAG: hypothetical protein COT75_00405 [Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10] diamond 1038 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10
29634516 29634516 PRJNA505329_P_NODE_45010_length_166_cov_1.760684_g44539_i0 PRJNA505329 45010 166 1.760684 2.92273544 Candidatus Beckwithbacteria bacterium CG23_combo_of_CG 2053519 Bacteria Bacteria 42.7 0.0129   NR PIP53016.1 1974497 g44539 i0 45.8 0.867469879518072 48 25 86.7 1 21 164 202 248 PIP53016.1 MAG: chaperonin GroEL, partial [Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_34_8] diamond 144 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_34_8
29850418 29850418 PRJNA1148190_P_NODE_588171_length_251_cov_0.865169_g576998_i0 PRJNA1148190 588171 251 0.865169 2.17157419 Candidatus Beckwithbacteria bacterium 2053519 Bacteria Bacteria 103 1.3299999999999999e-24   NR NMB56414.1 2053519 g576998 i0 59.5 1.00398406374502 84 33 99.2 1 3 251 24 107 NMB56414.1 hypothetical protein [Candidatus Beckwithbacteria bacterium] diamond 252 103 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium
30028867 30028867 PRJNA340009_P_NODE_58711_length_171_cov_1.639344_g58404_i0 PRJNA340009 58711 171 1.639344 2.80327824 root 1 Root_unresolved Root_unresolved 82.4 1.5e-16   NR PIS08688.1 1974495 g58404 i0 62 1.75438596491228 50 19 87.7 0 150 1 672 721 PIS08688.1 MAG: penicillin-binding protein [Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10] diamond 300 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10
30641306 30641306 PRJNA1226487_P_NODE_50293_length_272_cov_1.547739_g50191_i0 PRJNA1226487 50293 272 1.547739 4.20985008 Candidatus Beckwithbacteria bacterium CG1 2053519 Bacteria Bacteria 42.7 0.0498   NR PIS09142.1 1974495 g50191 i0 46.2 0.430147058823529 39 21 43 0 216 100 285 323 PIS09142.1 MAG: hypothetical protein COT75_02680 [Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10] diamond 117 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_34_10
30766287 30766287 PRJNA1148190_P_NODE_421134_length_282_cov_1.368421_g409961_i0 PRJNA1148190 421134 282 1.368421 3.85894722 Candidatus Beckwithbacteria bacterium CG23_combo_of_CG 2053519 Bacteria Bacteria 110 5.9000000000000005e-27   NR PIP51780.1 1974498 g409961 i0 60.2 0.936170212765957 88 34 92.6 1 282 22 161 248 PIP51780.1 MAG: hypothetical protein COX09_05225 [Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_47_9] diamond 264 110 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_47_9
31631385 31631385 PRJNA703759_P_NODE_48616_length_243_cov_1.576471_g48140_i0 PRJNA703759 48616 243 1.576471 3.83082453 Candidatus Beckwithbacteria bacterium 2053519 Bacteria Bacteria 109 1.84e-26   NR NMC36392.1 2053519 g48140 i0 67.5 1.02469135802469 83 25 100 1 243 1 252 334 NMC36392.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Candidatus Beckwithbacteria bacterium] diamond 249 109 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium
32094078 32094078 PRJNA1148190_P_NODE_302178_length_319_cov_1.170732_g291005_i0 PRJNA1148190 302178 319 1.170732 3.73463508 Candidatus Beckwithbacteria bacterium 2053519 Bacteria Bacteria 72.8 2.57e-12   NR NMC36625.1 2053519 g291005 i0 42 0.940438871473354 100 57 93.1 1 305 9 339 438 NMC36625.1 hypothetical protein [Candidatus Beckwithbacteria bacterium] diamond 300 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium
32131267 32131267 PRJNA482207_P_NODE_17278_length_266_cov_1.492228_g17168_i0 PRJNA482207 17278 266 1.492228 3.96932648 Candidatus Beckwithbacteria bacterium 2053519 Bacteria Bacteria 65.1 2.21e-11   NR NMC36244.1 2053519 g17168 i0 58.7 3.40601503759398 63 25 69.9 1 187 2 1 63 NMC36244.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Candidatus Beckwithbacteria bacterium] diamond 906 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium
33099046 33099046 PRJEB20058_P_NODE_25462_length_827_cov_8.232376_g23197_i0 PRJEB20058 25462 827 8.232376 68.08174952 Candidatus Beckwithbacteria bacterium 2053519 Bacteria Bacteria 65.9 1.43e-8   NR MFH2062283.1 2053519 g23197 i0 34.4 0.453446191051995 125 74 45.3 3 796 422 135 251 MFH2062283.1 hypothetical protein [Candidatus Beckwithbacteria bacterium] diamond 375 65.9 1 Bacteria Bacteria candidate phyla   Candidatus Beckwithiibacteriota         Candidatus Beckwithbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;