RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA999747" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 4 ✖

bioproject 1

  • PRJNA999747 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7358284 7358284 PRJNA999747_S_NODE_3966_length_159_cov_1.960938_g3934_i0 PRJNA999747 3966 159 1.960938 3.11789142 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 52.8 0.013   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3934 i0 100 0.176100628930818 28 0 18 0 1 28 31 4 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16283332 16283332 PRJNA999747_S_NODE_2753_length_187_cov_5.730769_g2721_i0 PRJNA999747 2753 187 5.730769 10.71653803 Caudoviricetes sp. 2832643 Viruses Viruses 335 1.4199999999999996e-87   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g2721 i0 99.457 276.368983957219 184 1 98 0 4 187 18090 17907 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 51681 335 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21382738 21382738 PRJNA999747_S_NODE_2657_length_190_cov_7.886792_g2625_i0 PRJNA999747 2657 190 7.886792 14.9849048 Ripajed virus 3130769 Viruses Viruses 91.6 3.46e-14   NTclustered gi|2717320728|gb|PP173071.1| 3130769 g2625 i0 89.041 3.00526315789474 73 8 38 0 95 167 134 206 MAG: Ripajed virus isolate KCAP3_k141_11048 genomic sequence blastn 571 91.6 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripajed virus
23932997 23932997 PRJNA999747_S_NODE_239_length_487_cov_13.618421_g212_i0 PRJNA999747 239 487 13.618421 66.32171027 Caudoviricetes sp. 2832643 Viruses Viruses 606 8.079999999999998e-169   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g212 i0 97.472 459.848049281314 356 8 73 1 1 355 18064 18419 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 223946 606 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;