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contig_metadata

18 rows where bioproject = "PRJNA999747" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA999747 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2549857 2549857 PRJNA999747_S_NODE_142_length_573_cov_210.191882_g120_i0 PRJNA999747 142 573 210.191882 1204.39948386 Acanthamoeba 5754 Discosea other_Eukaryota 935 0   NTclustered gi|507412|gb|U07416.1|ACU07416 5755 g120 i0 96.479 99.4328097731239 568 17 99 3 4 570 702 1267 Acanthamoeba castellanii Neff ATCC 50373 18S rRNA gene blastn 56975 935 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9908762 9908762 PRJNA999747_S_NODE_2748_length_187_cov_9.621795_g2716_i0 PRJNA999747 2748 187 9.621795 17.99275665 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 311 2.39e-80   NTclustered gi|300078498|gb|GU001160.1| 5755 g2716 i0 97.283 69.0695187165775 184 3 98 1 4 187 7427 7608 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12916 311 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11477937 11477937 PRJNA999747_S_NODE_1649_length_234_cov_35.960591_g1617_i0 PRJNA999747 1649 234 35.960591 84.14778294 Acanthamoeba 5754 Discosea other_Eukaryota 416 6.449999999999999e-112   NTclustered gi|507412|gb|U07416.1|ACU07416 5755 g1617 i0 99.134 98.7264957264957 231 2 99 0 4 234 1646 1876 Acanthamoeba castellanii Neff ATCC 50373 18S rRNA gene blastn 23102 416 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12459736 12459736 PRJNA999747_S_NODE_1230_length_272_cov_20.464730_g1198_i0 PRJNA999747 1230 272 20.46473 55.6640656 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 420 5.94e-113   NTclustered gi|300078498|gb|GU001160.1| 5755 g1198 i0 96.774 4.01838235294118 248 6 91 2 1 248 7586 7831 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1093 420 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13734106 13734106 PRJNA999747_S_NODE_511_length_374_cov_9.833819_g479_i0 PRJNA999747 511 374 9.833819 36.77848306 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 651 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g479 i0 98.645 14.2139037433155 369 2 99 2 1 369 6091 6456 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5316 651 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13734113 13734113 PRJNA999747_S_NODE_851_length_311_cov_21.217857_g819_i0 PRJNA999747 851 311 21.217857 65.98753527 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 568 2.3299999999999995e-157   NTclustered gi|300078498|gb|GU001160.1| 5755 g819 i0 100 13.4405144694534 307 0 99 0 3 309 7061 6755 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4180 568 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14028013 14028013 PRJNA999747_S_NODE_3391_length_170_cov_41.877698_g3359_i0 PRJNA999747 3391 170 41.877698 71.1920866 Acanthamoeba 5754 Discosea other_Eukaryota 309 7.64e-80   NTclustered gi|507412|gb|U07416.1|ACU07416 5755 g3359 i0 100 93.5941176470588 167 0 98 0 4 170 1255 1421 Acanthamoeba castellanii Neff ATCC 50373 18S rRNA gene blastn 15911 309 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15302070 15302070 PRJNA999747_S_NODE_152_length_566_cov_59.285981_g130_i0 PRJNA999747 152 566 59.285981 335.55865246 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 992 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g130 i0 98.41 38.8056537102473 566 6 99 1 1 563 4509 3944 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21964 998 0.993987975951904 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20107131 20107131 PRJNA999747_S_NODE_196_length_518_cov_75.618070_g170_i0 PRJNA999747 196 518 75.61807 391.7016026 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 929 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g170 i0 99.225 8.34169884169884 516 2 99 2 2 515 5930 5415 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4321 929 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20400544 20400544 PRJNA999747_S_NODE_1596_length_238_cov_102.956522_g1564_i0 PRJNA999747 1596 238 102.956522 245.03652236 Acanthamoeba 5754 Discosea other_Eukaryota 355 1.45e-93   NTclustered gi|507412|gb|U07416.1|ACU07416 5755 g1564 i0 94.017 98.2016806722689 234 14 98 0 5 238 1873 2106 Acanthamoeba castellanii Neff ATCC 50373 18S rRNA gene blastn 23372 355 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20400546 20400546 PRJNA999747_S_NODE_1836_length_222_cov_19.303665_g1804_i0 PRJNA999747 1836 222 19.303665 42.8541363 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 405 1.31e-108   NTclustered gi|300078498|gb|GU001160.1| 5755 g1804 i0 100 48.2792792792793 219 0 99 0 1 219 4712 4494 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10718 405 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21676601 21676601 PRJNA999747_S_NODE_977_length_295_cov_80.151515_g945_i0 PRJNA999747 977 295 80.151515 236.44696925 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 512 1.04e-140   NTclustered gi|909719646|gb|KT185626.1| 5755 g945 i0 97.966 53.0949152542373 295 6 100 0 1 295 3894 3600 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15663 512 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24225801 24225801 PRJNA999747_S_NODE_1839_length_222_cov_9.706806_g1807_i0 PRJNA999747 1839 222 9.706806 21.54910932 Acanthamoeba 5754 Discosea other_Eukaryota 403 4.72e-108   NTclustered gi|507412|gb|U07416.1|ACU07416 5755 g1807 i0 100 97.8738738738739 218 0 98 0 1 218 389 172 Acanthamoeba castellanii Neff ATCC 50373 18S rRNA gene blastn 21728 403 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25206682 25206682 PRJNA999747_S_NODE_2520_length_194_cov_42.055215_g2488_i0 PRJNA999747 2520 194 42.055215 81.5871171 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 353 4.1e-93   NTclustered gi|300078498|gb|GU001160.1| 5755 g2488 i0 100 111.871134020619 191 0 98 0 4 194 5171 5361 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21703 353 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26804919 26804919 PRJNA999747_S_NODE_761_length_325_cov_2.380952_g729_i0 PRJNA999747 761 325 2.380952 7.738094 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99 2.75e-22   NR XP_004352561.1 1257118 g729 i0 46.2 1.94769230769231 104 55 96 1 323 12 171 273 XP_004352561.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 633 99 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27974133 27974133 PRJNA999747_S_NODE_1645_length_235_cov_1.700980_g1613_i0 PRJNA999747 1645 235 1.70098 3.997303 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 90.1 4.57e-20   NR XP_004333780.1 1257118 g1613 i0 50.6 1.96595744680851 77 38 98.3 0 5 235 75 151 XP_004333780.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 462 90.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28005914 28005914 PRJNA999747_S_NODE_2365_length_200_cov_2.704142_g2333_i0 PRJNA999747 2365 200 2.704142 5.408284 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.5 2.81e-15   NR XP_004338635.1 1257118 g2333 i0 62.3 1.8 61 23 91.5 0 9 191 75 135 XP_004338635.1 60S ribosomal protein L36, putative [Acanthamoeba castellanii str. Neff] diamond 360 75.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28005915 28005915 PRJNA999747_S_NODE_3845_length_161_cov_2.338462_g3813_i0 PRJNA999747 3845 161 2.338462 3.76492382 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 42.7 0.0122   NR XP_004352561.1 1257118 g3813 i0 47.2 0.670807453416149 36 19 67.1 0 52 159 142 177 XP_004352561.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 108 42.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;