RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA999747" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA999747 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2549888 2549888 PRJNA999747_S_NODE_4482_length_151_cov_1.850000_g4450_i0 PRJNA999747 4482 151 1.85 2.7935 Parvicapsula 109800 Cnidaria other_Eukaryota 91.6 2.61e-14   NTclustered gi|605060084|gb|KF874224.1| 109801 g4450 i0 86.905 4.84105960264901 84 7 55 4 59 141 1110 1190 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 731 91.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
13734070 13734070 PRJNA999747_S_NODE_1011_length_291_cov_1214.353846_g979_i0 PRJNA999747 1011 291 1214.353846 3533.76969186 Eucheilota maculata 661990 Cnidaria other_Eukaryota 161 4.29e-35   NTclustered gi|256674540|gb|FJ550444.1| 661990 g979 i0 92.105 51.2027491408935 114 9 52 0 175 288 2173 2286 Eucheilota maculata 28S ribosomal RNA gene, partial sequence blastn 14900 161 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Campanulariidae Eucheilota Eucheilota maculata
25206685 25206685 PRJNA999747_S_NODE_2840_length_185_cov_1.396104_g2808_i0 PRJNA999747 2840 185 1.396104 2.5827924 root 1 Root_unresolved Root_unresolved 111 3.1900000000000004e-27   NR XP_065065123.1 499914 g2808 i0 85 7.78378378378378 60 9 97.3 0 4 183 140 199 XP_065065123.1 adenosylhomocysteinase B-like [Rhopilema esculentum] diamond 1440 111 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
28352962 28352962 PRJNA999747_S_NODE_206_length_512_cov_3.428274_g180_i0 PRJNA999747 206 512 3.428274 17.55276288 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 146 1.1099999999999998e-41   NR XP_065064962.1 499914 g180 i0 53.3 0.791015625 135 62 79.1 1 444 40 6 139 XP_065064962.1 coactosin-like protein [Rhopilema esculentum] diamond 405 146 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
28700439 28700439 PRJNA999747_S_NODE_2087_length_211_cov_2.438889_g2055_i0 PRJNA999747 2087 211 2.438889 5.14605579 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 81.3 6.66e-18   NR XP_031552790.1 6105 g2055 i0 63.1 0.924170616113744 65 22 92.4 1 208 14 51 113 XP_031552790.1 60S ribosomal protein L35a-like [Actinia tenebrosa] diamond 195 81.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
29931946 29931946 PRJNA999747_S_NODE_3551_length_167_cov_1.911765_g3519_i0 PRJNA999747 3551 167 1.911765 3.19264755 Hydra vulgaris 6087 Cnidaria other_Eukaryota 68.2 2.29e-12   NR XP_012553648.1 6087 g3519 i0 78 3.08982035928144 41 9 73.7 0 124 2 3 43 XP_012553648.1 large ribosomal subunit protein uL22 isoform X1 [Hydra vulgaris] diamond 516 68.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;