RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA999747" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA999747 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2255835 2255835 PRJNA999747_S_NODE_2582_length_193_cov_1.395062_g2550_i0 PRJNA999747 2582 193 1.395062 2.69246966 Abditibacteriota bacterium 2783868 Bacteria Bacteria 261 2.54e-65   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g2550 i0 91.579 1.96891191709845 190 14 98 1 1 190 2851359 2851172 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 380 261 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
9908763 9908763 PRJNA999747_S_NODE_2788_length_186_cov_5.541935_g2756_i0 PRJNA999747 2788 186 5.541935 10.3079991 Abditibacteriota bacterium 2783868 Bacteria Bacteria 141 3.299999999999999e-29   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g2756 i0 86.154 538.241935483871 130 18 70 0 6 135 2850695 2850824 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 100113 141 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
17558492 17558492 PRJNA999747_S_NODE_574_length_358_cov_26.819572_g542_i0 PRJNA999747 574 358 26.819572 96.01406776 Abditibacteriota bacterium 2783868 Bacteria Bacteria 555 2.1199999999999998e-153   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g542 i0 94.737 236.167597765363 361 12 99 6 1 357 2852647 2852290 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 84548 555 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
18832315 18832315 PRJNA999747_S_NODE_2715_length_188_cov_11.426752_g2683_i0 PRJNA999747 2715 188 11.426752 21.48229376 Abditibacteriota bacterium 2783868 Bacteria Bacteria 315 1.8599999999999999e-81   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g2683 i0 97.802 329.882978723404 182 4 97 0 2 183 2852831 2852650 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 62018 315 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;