RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where bioproject = "PRJNA999043" and tax_phylum = "Arthropoda"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA999043 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
979557 979557 PRJNA999043_P_NODE_16141_length_336_cov_1.273764_g16046_i0 PRJNA999043 16141 336 1.273764 4.27984704 Tropilaelaps mercedesae 418985 Arthropoda Arthropoda 176 6e-51   NR OQR74553.1 418985 g16046 i0 82.1 1.99107142857143 112 19 99.1 1 3 335 36 147 OQR74553.1 hypothetical protein BIW11_08987, partial [Tropilaelaps mercedesae] diamond 669 176 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Laelapidae Tropilaelaps Tropilaelaps mercedesae
980273 980273 PRJNA999043_P_NODE_9421_length_543_cov_1.431915_g9329_i0 PRJNA999043 9421 543 1.431915 7.77529845 Galendromus occidentalis 34638 Arthropoda Arthropoda 322 3.69e-83   NTclustered gi|1634083861|ref|XM_029111724.1| 34638 g9329 i0 84.024 0.622467771639042 338 51 62 2 17 351 1 338 PREDICTED: Metaseiulus occidentalis adult-specific rigid cuticular protein 15.5-like (LOC100903176), mRNA blastn 338 322 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
1274026 1274026 PRJNA999043_P_NODE_21061_length_256_cov_1.262295_g20966_i0 PRJNA999043 21061 256 1.262295 3.2314752 Phytoseiidae 34636 Arthropoda Arthropoda 473 4.189999999999999e-129   NTclustered gi|365799480|dbj|AB618055.1| 84382 g20966 i0 100 100.12109375 256 0 100 0 1 256 19 274 Neoseiulus californicus genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, isolate: 02NcaCI blastn 25631 473 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
3529995 3529995 PRJNA999043_P_NODE_12183_length_440_cov_2.656676_g12089_i0 PRJNA999043 12183 440 2.656676 11.6893744 Neoseiulus californicus 84382 Arthropoda Arthropoda 813 0   NTclustered gi|2583621169|gb|OR195436.2| 84382 g12089 i0 100 3.45909090909091 440 0 100 0 1 440 11563 11124 Neoseiulus californicus isolate Biodefence Line-02 mitochondrion, complete genome blastn 1522 813 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
6082591 6082591 PRJNA999043_P_NODE_13045_length_415_cov_1.122807_g12950_i0 PRJNA999043 13045 415 1.1228070000000001 4.65964905 Galendromus occidentalis 34638 Arthropoda Arthropoda 326 2.13e-84   NTclustered gi|1078801832|ref|XR_001951152.1| 34638 g12950 i0 82.014 2.00963855421687 417 44 99 15 2 414 565 176 PREDICTED: Metaseiulus occidentalis uncharacterized LOC100904891 (LOC100904891), transcript variant X1, ncRNA blastn 834 326 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
6082612 6082612 PRJNA999043_P_NODE_13505_length_402_cov_0.936170_g13410_i0 PRJNA999043 13505 402 0.93617 3.7634034 Neoseiulus californicus 84382 Arthropoda Arthropoda 741 0   NTclustered gi|2583621169|gb|OR195436.2| 84382 g13410 i0 100 2.99253731343284 401 0 99 0 2 402 8833 8433 Neoseiulus californicus isolate Biodefence Line-02 mitochondrion, complete genome blastn 1203 741 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
9907760 9907760 PRJNA999043_P_NODE_16768_length_323_cov_0.924000_g16673_i0 PRJNA999043 16768 323 0.924 2.98452 Varroa destructor 109461 Arthropoda Arthropoda 212 7.97e-62   NR XP_022663764.1 109461 g16673 i0 92.5 1.98761609907121 107 8 99.4 0 322 2 584 690 XP_022663764.1 translation elongation factor 2-like [Varroa destructor] diamond 642 212 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Varroidae Varroa Varroa destructor
11182970 11182970 PRJNA999043_P_NODE_18829_length_287_cov_1.079439_g18734_i0 PRJNA999043 18829 287 1.079439 3.09798993 Neoseiulus californicus 84382 Arthropoda Arthropoda 531 2.799999999999999e-146   NTclustered gi|2583621169|gb|OR195436.2| 84382 g18734 i0 100 3 287 0 100 0 1 287 4398 4684 Neoseiulus californicus isolate Biodefence Line-02 mitochondrion, complete genome blastn 861 531 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
12459249 12459249 PRJNA999043_P_NODE_5810_length_761_cov_2.324128_g5729_i0 PRJNA999043 5810 761 2.324128 17.68661408 Neoseiulus californicus 84382 Arthropoda Arthropoda 1406 0   NTclustered gi|2424878079|ref|NC_069213.1| 84382 g5729 i0 100 64.5177398160315 761 0 100 0 1 761 9750 10510 Neoseiulus californicus mitochondrion, complete sequence blastn 49098 1406 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
12753322 12753322 PRJNA999043_P_NODE_18090_length_299_cov_1.362832_g17995_i0 PRJNA999043 18090 299 1.362832 4.07486768 Neoseiulus 84381 Arthropoda Arthropoda 553 6.25e-153   NTclustered gi|2419915145|gb|OQ190151.1| 84382 g17995 i0 100 67.7558528428094 299 0 100 0 1 299 41 339 Neoseiulus californicus isolate 123x cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 20259 553 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
13733116 13733116 PRJNA999043_P_NODE_18031_length_300_cov_1.017621_g17936_i0 PRJNA999043 18031 300 1.017621 3.052863 Galendromus occidentalis 34638 Arthropoda Arthropoda 294 4.1999999999999997e-75   NTclustered gi|391346772|ref|XM_003747595.1| 34638 g17936 i0 84.333 1 300 47 100 0 1 300 531 830 PREDICTED: Metaseiulus occidentalis 60S ribosomal protein L6 (LOC100905840), mRNA blastn 300 294 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
13733135 13733135 PRJNA999043_P_NODE_18411_length_293_cov_1.581818_g18316_i0 PRJNA999043 18411 293 1.581818 4.63472674 Neoseiulus californicus 84382 Arthropoda Arthropoda 534 2.21e-147   NTclustered gi|2583621169|gb|OR195436.2| 84382 g18316 i0 99.659 8.11945392491468 293 0 100 1 1 293 1210 1501 Neoseiulus californicus isolate Biodefence Line-02 mitochondrion, complete genome blastn 2379 534 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
13733260 13733260 PRJNA999043_P_NODE_21151_length_255_cov_1.269231_g21056_i0 PRJNA999043 21151 255 1.269231 3.23653905 Neoseiulus californicus 84382 Arthropoda Arthropoda 472 1.5e-128   NTclustered gi|2583621169|gb|OR195436.2| 84382 g21056 i0 100 3.90980392156863 255 0 100 0 1 255 4147 4401 Neoseiulus californicus isolate Biodefence Line-02 mitochondrion, complete genome blastn 997 472 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
15007542 15007542 PRJNA999043_P_NODE_18992_length_284_cov_1.459716_g18897_i0 PRJNA999043 18992 284 1.459716 4.14559344 Galendromus occidentalis 34638 Arthropoda Arthropoda 331 3.0100000000000002e-86   NTclustered gi|1634086026|ref|XM_029112624.1| 34638 g18897 i0 87.9 77.8767605633803 281 34 99 0 4 284 8105 7825 PREDICTED: Metaseiulus occidentalis myosin heavy chain, muscle (LOC100899376), mRNA blastn 22117 331 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
15007645 15007645 PRJNA999043_P_NODE_21452_length_252_cov_1.055866_g21357_i0 PRJNA999043 21452 252 1.055866 2.66078232 Neoseiulus californicus 84382 Arthropoda Arthropoda 466 6.89e-127   NTclustered gi|2424878079|ref|NC_069213.1| 84382 g21357 i0 100 97.3253968253968 252 0 100 0 1 252 458 709 Neoseiulus californicus mitochondrion, complete sequence blastn 24526 466 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
16282449 16282449 PRJNA999043_P_NODE_19393_length_278_cov_1.492683_g19298_i0 PRJNA999043 19393 278 1.492683 4.14965874 Galendromus occidentalis 34638 Arthropoda Arthropoda 211 3.9900000000000002e-50   NTclustered gi|1078801824|ref|XM_018638354.1| 34638 g19298 i0 81.053 5.48561151079137 285 37 100 11 1 278 20 294 PREDICTED: Metaseiulus occidentalis ferritin heavy chain, oocyte isoform (LOC100907502), transcript variant X4, mRNA blastn 1525 211 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
18831181 18831181 PRJNA999043_P_NODE_13475_length_402_cov_1.954407_g13380_i0 PRJNA999043 13475 402 1.954407 7.85671614 Neoseiulus californicus 84382 Arthropoda Arthropoda 741 0   NTclustered gi|2583621169|gb|OR195436.2| 84382 g13380 i0 100 4.06965174129353 401 0 99 0 2 402 2030 1630 Neoseiulus californicus isolate Biodefence Line-02 mitochondrion, complete genome blastn 1636 741 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
18831218 18831218 PRJNA999043_P_NODE_14355_length_379_cov_1.006536_g14260_i0 PRJNA999043 14355 379 1.006536 3.81477144 Timema shepardi 629360 Arthropoda Arthropoda 52.8 0.036   NTclustered gi|1937826618|emb|OC000300.1| 629360 g14260 i0 100 0.0738786279683377 28 0 7 0 206 233 36796 36769 2_Tsi_b3v08 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema shepardi
18831573 18831573 PRJNA999043_P_NODE_23575_length_245_cov_0.895349_g23480_i0 PRJNA999043 23575 245 0.895349 2.19360505 Penaeus monodon 6687 Arthropoda Arthropoda 54.7 0.006   NTclustered gi|1935939192|ref|XM_037940161.1| 6687 g23480 i0 100 0.118367346938776 29 0 12 0 6 34 953 981 PREDICTED: Penaeus monodon cell wall protein SED1-like (LOC119591421), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Penaeidae Penaeus Penaeus monodon
21676423 21676423 PRJNA999043_P_NODE_8677_length_575_cov_1.525896_g8585_i0 PRJNA999043 8677 575 1.525896 8.773902 Aphis 80764 Arthropoda Arthropoda 1061 0   NTclustered gi|1752270906|gb|MN102349.1| 80765 g8585 i0 100 100.878260869565 574 0 99 0 1 574 12548 11975 Aphis gossypii mitochondrion, complete genome blastn 58005 1061 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Aphis Aphis gossypii
22657082 22657082 PRJNA999043_P_NODE_5658_length_775_cov_12.927350_g5579_i0 PRJNA999043 5658 775 12.92735 100.1869625 Neoseiulus californicus 84382 Arthropoda Arthropoda 1432 0   NTclustered gi|2583621169|gb|OR195436.2| 84382 g5579 i0 100 58.3741935483871 775 0 100 0 1 775 5351 6125 Neoseiulus californicus isolate Biodefence Line-02 mitochondrion, complete genome blastn 45240 1432 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Neoseiulus Neoseiulus californicus
22951755 22951755 PRJNA999043_P_NODE_22198_length_249_cov_0.875000_g22103_i0 PRJNA999043 22198 249 0.875 2.17875 Drosophila 7215 Arthropoda Arthropoda 460 3.16e-125   NTclustered gi|21064836|gb|AY113643.1| 7227 g22103 i0 100 57.4578313253012 249 0 100 0 1 249 364 116 Drosophila melanogaster RH74176 full insert cDNA blastn 14307 460 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Drosophilidae Drosophila Drosophila melanogaster
27247774 27247774 PRJNA999043_P_NODE_23963_length_244_cov_0.871345_g23868_i0 PRJNA999043 23963 244 0.871345 2.1260818 Galendromus occidentalis 34638 Arthropoda Arthropoda 52.8 1.11e-5   NR XP_003737251.1 34638 g23868 i0 100 0.307377049180328 25 0 30.7 0 169 243 1 25 XP_003737251.1 serine/threonine-protein kinase PAK 3 [Galendromus occidentalis] diamond 75 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
27721969 27721969 PRJNA999043_P_NODE_17784_length_304_cov_1.000000_g17689_i0 PRJNA999043 17784 304 1 3.04 Galendromus occidentalis 34638 Arthropoda Arthropoda 155 3.05e-42   NR XP_003740670.1 34638 g17689 i0 75.2 0.996710526315789 101 25 99.7 0 304 2 117 217 XP_003740670.1 cholinesterase [Galendromus occidentalis] diamond 303 155 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
27942640 27942640 PRJNA999043_P_NODE_24885_length_241_cov_0.916667_g24790_i0 PRJNA999043 24885 241 0.916667 2.20916747 Galendromus occidentalis 34638 Arthropoda Arthropoda 43.9 0.0149   NR XP_028967959.1 34638 g24790 i0 59 0.485477178423237 39 16 48.5 0 8 124 1861 1899 XP_028967959.1 titin homolog [Galendromus occidentalis] diamond 117 43.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
31100624 31100624 PRJNA999043_P_NODE_13515_length_401_cov_2.320122_g13420_i0 PRJNA999043 13515 401 2.320122 9.30368922 Galendromus occidentalis 34638 Arthropoda Arthropoda 73.6 1.51e-13   NR XP_003739867.1 34638 g13420 i0 46.2 1.18204488778055 158 35 90.5 3 376 14 1 145 XP_003739867.1 cuticle protein 16.5 [Galendromus occidentalis] diamond 474 73.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis
32055394 32055394 PRJNA999043_P_NODE_22498_length_248_cov_0.880000_g22403_i0 PRJNA999043 22498 248 0.88 2.1824 Varroa 62624 Arthropoda Arthropoda 170 1.26e-49   NR XP_022705918.1 62625 g22403 i0 95.1 2.9758064516129 82 4 99.2 0 247 2 170 251 XP_022705918.1 synaptic vesicle membrane protein VAT-1 homolog-like isoform X2 [Varroa jacobsoni] diamond 738 170 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Varroidae Varroa Varroa jacobsoni
32271227 32271227 PRJNA999043_P_NODE_21438_length_252_cov_1.290503_g21343_i0 PRJNA999043 21438 252 1.290503 3.25206756 Galendromus occidentalis 34638 Arthropoda Arthropoda 71.2 2.98e-12   NR XP_028967367.1 34638 g21343 i0 60.8 0.94047619047619 79 24 85.7 1 36 251 1 79 XP_028967367.1 uncharacterized protein KIAA0754-like [Galendromus occidentalis] diamond 237 71.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Phytoseiidae Galendromus Galendromus occidentalis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;