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contig_metadata

1,362 rows where bioproject = "PRJNA998413" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 1,362 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA998413 · 1,362 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
979080 979080 PRJNA998413_S_NODE_10041_length_222_cov_1.264151_g10010_i0 PRJNA998413 10041 222 1.264151 2.80641522 Odocoileus virginianus 9874 Chordata Chordata 128 3.18e-25   NTclustered gi|2871743186|ref|XR_011489399.1| 9874 g10010 i0 97.333 39.4774774774775 75 2 34 0 148 222 1544 1618 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139036582), ncRNA blastn 8764 128 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
979084 979084 PRJNA998413_S_NODE_10201_length_221_cov_1.272152_g10170_i0 PRJNA998413 10201 221 1.272152 2.81145592 Sus scrofa 9823 Chordata Chordata 78.7 3.23e-10   NTclustered gi|281426936|emb|FP102262.3| 9823 g10170 i0 89.062 1.14932126696833 64 5 28 1 1 62 103795 103858 Pig DNA sequence from clone CH242-56M13 on chromosome X, complete sequence blastn 254 78.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
979091 979091 PRJNA998413_S_NODE_10801_length_217_cov_1.305195_g10770_i0 PRJNA998413 10801 217 1.305195 2.83227315 Bos javanicus 9906 Chordata Chordata 95.3 3.14e-15   NTclustered gi|2633775562|ref|XR_009731543.1| 9906 g10770 i0 100 26.6129032258065 51 0 24 0 167 217 15203 15153 PREDICTED: Bos javanicus uncharacterized LOC133232964 (LOC133232964), transcript variant X2, ncRNA blastn 5775 95.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
979095 979095 PRJNA998413_S_NODE_10961_length_217_cov_0.870130_g10930_i0 PRJNA998413 10961 217 0.87013 1.8881821 Bos mutus 72004 Chordata Chordata 161 3.05e-35   NTclustered gi|2868759828|ref|XR_011466607.1| 72004 g10930 i0 91.525 141.884792626728 118 9 54 1 8 125 6461 6345 PREDICTED: Bos mutus uncharacterized lncRNA (LOC138983933), ncRNA blastn 30789 161 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
979097 979097 PRJNA998413_S_NODE_11081_length_216_cov_1.313725_g11050_i0 PRJNA998413 11081 216 1.313725 2.837646 Odocoileus virginianus 9874 Chordata Chordata 137 5.119999999999999e-28   NTclustered gi|2871684016|ref|XM_070451342.1| 9874 g11050 i0 92.708 87.5046296296296 96 6 44 1 1 95 4819 4724 PREDICTED: Odocoileus virginianus ATP binding cassette subfamily C member 11 (ABCC11), transcript variant X6, mRNA blastn 18901 137 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
979098 979098 PRJNA998413_S_NODE_11101_length_216_cov_1.287582_g11070_i0 PRJNA998413 11101 216 1.287582 2.78117712 Bos taurus 9913 Chordata Chordata 302 1.7100000000000001e-77   NTclustered gi|1068294018|gb|KX592814.1| 9913 g11070 i0 92.823 609.587962962963 209 13 100 2 1 208 8569675 8569468 Bos taurus isolate Dominette_000065F genomic sequence blastn 131671 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979100 979100 PRJNA998413_S_NODE_11201_length_216_cov_0.875817_g11170_i0 PRJNA998413 11201 216 0.875817 1.89176472 Delphinapterus leucas 9749 Chordata Chordata 161 3.04e-35   NTclustered gi|1741509517|ref|XM_030760957.1| 9749 g11170 i0 95.098 354.490740740741 102 5 47 0 1 102 744 845 PREDICTED: Delphinapterus leucas nuclear receptor interacting protein 1 (NRIP1), transcript variant X8, mRNA blastn 76570 161 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Monodontidae Delphinapterus Delphinapterus leucas
979102 979102 PRJNA998413_S_NODE_11261_length_216_cov_0.869281_g11230_i0 PRJNA998413 11261 216 0.869281 1.87764696 Balaenoptera acutorostrata 9767 Chordata Chordata 82.4 2.43e-11   NTclustered gi|2526619565|ref|XM_057533757.1| 9767 g11230 i0 85.185 15.375 81 10 37 2 84 163 1458 1379 PREDICTED: Balaenoptera acutorostrata chromosome 19 C19orf18 homolog (C19H19orf18), mRNA blastn 3321 82.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera acutorostrata
979105 979105 PRJNA998413_S_NODE_11381_length_215_cov_1.322368_g11350_i0 PRJNA998413 11381 215 1.322368 2.8430912 Bos indicus 9915 Chordata Chordata 248 2.25e-61   NTclustered gi|2878548385|ref|XM_070795524.1| 9915 g11350 i0 87.179 202.209302325581 234 11 100 7 1 215 2069 2302 PREDICTED: Bos indicus centrosomal protein 57 like 1 (CEP57L1), transcript variant X3, mRNA blastn 43475 248 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
979107 979107 PRJNA998413_S_NODE_11421_length_215_cov_0.881579_g11390_i0 PRJNA998413 11421 215 0.881579 1.89539485 Ovis aries 9940 Chordata Chordata 333 6.039999999999999e-87   NTclustered gi|2607087778|ref|XM_060406250.1| 9940 g11390 i0 94.47 3.02790697674419 217 10 100 1 1 215 18833 18617 PREDICTED: Ovis aries sialophorin (SPN), transcript variant X3, mRNA blastn 651 333 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
979110 979110 PRJNA998413_S_NODE_11521_length_215_cov_0.881579_g11490_i0 PRJNA998413 11521 215 0.881579 1.89539485 Bos taurus 9913 Chordata Chordata 396 7.6e-106   NTclustered gi|50872219|gb|AC149665.2| 9913 g11490 i0 100 0.995348837209302 214 0 99 0 2 215 177894 178107 Bos taurus BAC CH240-60O13 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 214 396 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979113 979113 PRJNA998413_S_NODE_11641_length_214_cov_1.331126_g11610_i0 PRJNA998413 11641 214 1.331126 2.84860964 Sus scrofa 9823 Chordata Chordata 167 6.449999999999999e-37   NTclustered gi|334278864|emb|CU862025.11| 9823 g11610 i0 83.799 30.1728971962617 179 25 82 2 10 184 161888 162066 Pig DNA sequence from clone CH242-121D17 on chromosome X, complete sequence blastn 6457 167 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
979115 979115 PRJNA998413_S_NODE_11701_length_214_cov_0.887417_g11670_i0 PRJNA998413 11701 214 0.887417 1.89907238 Globicephala melas 9731 Chordata Chordata 167 6.449999999999999e-37   NTclustered gi|2597728789|ref|XM_030843116.2| 9731 g11670 i0 82.439 89.8831775700935 205 23 91 6 7 200 9442 9644 PREDICTED: Globicephala melas charged multivesicular body protein 6 (CHMP6), mRNA blastn 19235 167 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Globicephala Globicephala melas
979116 979116 PRJNA998413_S_NODE_11761_length_214_cov_0.887417_g11730_i0 PRJNA998413 11761 214 0.887417 1.89907238 Canis lupus 9612 Chordata Chordata 78.7 3.11e-10   NTclustered gi|118344490|gb|AC187030.5| 9615 g11730 i0 79.487 0.546728971962617 117 18 52 4 1 112 45577 45692 Canis Familiaris chromosome 20, clone XX-21B12, complete sequence blastn 117 78.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
979117 979117 PRJNA998413_S_NODE_11781_length_214_cov_0.887417_g11750_i0 PRJNA998413 11781 214 0.887417 1.89907238 Bos taurus 9913 Chordata Chordata 56.5 0.001   NTclustered gi|2587622861|ref|XR_009496046.1| 9913 g11750 i0 96.97 0.771028037383178 33 1 15 0 1 33 24122 24090 PREDICTED: Bos taurus aph-1 homolog B, gamma-secretase subunit (APH1B), transcript variant X4, misc_RNA blastn 165 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979119 979119 PRJNA998413_S_NODE_11941_length_213_cov_1.340000_g11910_i0 PRJNA998413 11941 213 1.34 2.8542 Bos taurus 9913 Chordata Chordata 394 2.7e-105   NTclustered gi|2587669747|ref|XR_815665.4| 9913 g11910 i0 100 10.5070422535211 213 0 100 0 1 213 2184 2396 PREDICTED: Bos taurus uncharacterized lncRNA (LOC101905123), ncRNA blastn 2238 394 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979120 979120 PRJNA998413_S_NODE_11961_length_213_cov_1.340000_g11930_i0 PRJNA998413 11961 213 1.34 2.8542 Orcinus orca 9733 Chordata Chordata 108 3.94e-19   NTclustered gi|2280708502|ref|XR_007477715.1| 9733 g11930 i0 82.4 15.3661971830986 125 20 58 2 40 163 6894 7017 PREDICTED: Orcinus orca uncharacterized LOC125964566 (LOC125964566), transcript variant X2, ncRNA blastn 3273 108 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
979126 979126 PRJNA998413_S_NODE_12221_length_212_cov_1.791946_g12190_i0 PRJNA998413 12221 212 1.791946 3.79892552 Odocoileus virginianus 9874 Chordata Chordata 145 2.99e-30   NTclustered gi|2871678640|ref|XM_020907600.2| 9874 g12190 i0 84.667 78.811320754717 150 18 69 5 1 147 721 868 PREDICTED: Odocoileus virginianus MORN repeat containing 5 (MORN5), transcript variant X1, mRNA blastn 16708 145 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
979127 979127 PRJNA998413_S_NODE_12261_length_212_cov_1.348993_g12230_i0 PRJNA998413 12261 212 1.348993 2.85986516 Pseudorca crassidens 82174 Chordata Chordata 115 2.3400000000000003e-21   NTclustered gi|2791872387|ref|XR_010935913.1| 82174 g12230 i0 77.67 14.25 206 35 94 7 1 200 7175 7375 PREDICTED: Pseudorca crassidens methionine adenosyltransferase 1A (MAT1A), transcript variant X6, misc_RNA blastn 3021 115 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
979130 979130 PRJNA998413_S_NODE_12341_length_212_cov_0.899329_g12310_i0 PRJNA998413 12341 212 0.899329 1.90657748 Mus musculus 10090 Chordata Chordata 392 9.67e-105   NTclustered gi|29501939|gb|AC124586.3| 10090 g12310 i0 100 12.8301886792453 212 0 100 0 1 212 57701 57490 Mus musculus BAC clone RP23-132E20 from 12, complete sequence blastn 2720 392 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
979131 979131 PRJNA998413_S_NODE_12361_length_212_cov_0.899329_g12330_i0 PRJNA998413 12361 212 0.899329 1.90657748 Bubalus kerabau 3119969 Chordata Chordata 327 2.77e-85   NTclustered gi|2496508412|ref|XR_008717754.1| 3119969 g12330 i0 94.419 19.3679245283019 215 8 99 3 2 212 4553 4339 PREDICTED: Bubalus kerabau uncharacterized LOC129659036 (LOC129659036), transcript variant X1, ncRNA blastn 4106 327 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
979133 979133 PRJNA998413_S_NODE_12401_length_212_cov_0.899329_g12370_i0 PRJNA998413 12401 212 0.899329 1.90657748 Dama dama 30532 Chordata Chordata 302 1.68e-77   NTclustered gi|2625296872|ref|XR_009696673.1| 30532 g12370 i0 92.925 2 212 8 99 3 2 212 3915 4120 PREDICTED: Dama dama uncharacterized LOC133072230 (LOC133072230), transcript variant X1, ncRNA blastn 424 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
979134 979134 PRJNA998413_S_NODE_12581_length_211_cov_1.358108_g12550_i0 PRJNA998413 12581 211 1.358108 2.86560788 Bos javanicus 9906 Chordata Chordata 104 5.04e-18   NTclustered gi|2633685224|ref|XR_009736623.1| 9906 g12550 i0 87.64 31.4028436018957 89 11 42 0 78 166 3564 3476 PREDICTED: Bos javanicus uncharacterized LOC133248136 (LOC133248136), ncRNA blastn 6626 104 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
979136 979136 PRJNA998413_S_NODE_12621_length_211_cov_0.986486_g12590_i0 PRJNA998413 12621 211 0.986486 2.08148546 Bos taurus 9913 Chordata Chordata 381 2.0799999999999996e-101   NTclustered gi|314122303|gb|AC232758.4| 9913 g12590 i0 99.522 311.331753554502 209 1 99 0 3 211 23156 22948 Bos taurus Y Chr BAC CH240-486H15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 65691 381 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979137 979137 PRJNA998413_S_NODE_12661_length_211_cov_0.905405_g12630_i0 PRJNA998413 12661 211 0.905405 1.91040455 Mus musculus 10090 Chordata Chordata 357 3.5099999999999996e-94   NTclustered gi|21912646|emb|AL627445.21| 10090 g12630 i0 100 45.3507109004739 193 0 91 0 19 211 96223 96415 Mouse DNA sequence from clone RP23-81D2 on chromosome 11, complete sequence blastn 9569 357 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
979138 979138 PRJNA998413_S_NODE_12721_length_211_cov_0.905405_g12690_i0 PRJNA998413 12721 211 0.905405 1.91040455 Ovis aries 9940 Chordata Chordata 363 7.539999999999999e-96   NTclustered gi|2587918875|tpg|BK064708.1| 9940 g12690 i0 97.63 22.0142180094787 211 5 100 0 1 211 2208960 2209170 TPA: Ovis aries breed Rambouillet TRA/TRD locus blastn 4645 363 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
979140 979140 PRJNA998413_S_NODE_12841_length_210_cov_2.231293_g12810_i0 PRJNA998413 12841 210 2.231293 4.6857153 Bos indicus 9915 Chordata Chordata 388 1.24e-103   NTclustered gi|2878532008|ref|XM_070790768.1| 9915 g12810 i0 100 1 210 0 100 0 1 210 832 1041 PREDICTED: Bos indicus mitotic spindle assembly checkpoint protein MAD2A (LOC109553295), transcript variant X10, mRNA blastn 210 388 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
979141 979141 PRJNA998413_S_NODE_12861_length_210_cov_1.823129_g12830_i0 PRJNA998413 12861 210 1.823129 3.8285709 Monodon monoceros 40151 Chordata Chordata 239 1.32e-58   NTclustered gi|1655676901|ref|XM_029221909.1| 40151 g12830 i0 88.832 7.62380952380952 197 19 93 3 2 197 3559 3365 PREDICTED: Monodon monoceros protein kinase C beta (PRKCB), transcript variant X4, mRNA blastn 1601 239 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Monodontidae Monodon Monodon monoceros
979143 979143 PRJNA998413_S_NODE_12981_length_210_cov_0.911565_g12950_i0 PRJNA998413 12981 210 0.911565 1.9142865 Equus caballus 9796 Chordata Chordata 147 8.22e-31   NTclustered gi|242101118|emb|FN409728.1| 9796 g12950 i0 86.567 0.638095238095238 134 17 64 1 49 182 709 577 Equus caballus microsatellite DNA, locus ABGe15370 blastn 134 147 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus caballus
979144 979144 PRJNA998413_S_NODE_13061_length_210_cov_0.911565_g13030_i0 PRJNA998413 13061 210 0.911565 1.9142865 Bos javanicus 9906 Chordata Chordata 377 2.68e-100   NTclustered gi|2633679491|ref|XR_009735280.1| 9906 g13030 i0 99.048 2 210 2 100 0 1 210 15515 15306 PREDICTED: Bos javanicus uncharacterized LOC133244060 (LOC133244060), transcript variant X2, ncRNA blastn 420 377 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
979145 979145 PRJNA998413_S_NODE_13181_length_209_cov_1.828767_g13150_i0 PRJNA998413 13181 209 1.828767 3.82212303 Bos indicus 9915 Chordata Chordata 65.8 2.35e-6   NTclustered gi|2878525951|ref|XR_011566556.1| 9915 g13150 i0 90.196 0.732057416267943 51 4 24 1 151 201 6487 6536 PREDICTED: Bos indicus WAS/WASL-interacting protein family member 1-like (LOC139183088), transcript variant X1, misc_RNA blastn 153 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
979146 979146 PRJNA998413_S_NODE_13221_length_209_cov_1.376712_g13190_i0 PRJNA998413 13221 209 1.376712 2.87732808 Ovis aries 9940 Chordata Chordata 108 3.86e-19   NTclustered gi|2606979595|ref|XR_006059655.2| 9940 g13190 i0 89.412 4.27751196172249 85 9 41 0 15 99 11979 12063 PREDICTED: Ovis aries uncharacterized LOC121819415 (LOC121819415), ncRNA blastn 894 108 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
979147 979147 PRJNA998413_S_NODE_13241_length_209_cov_1.349315_g13210_i0 PRJNA998413 13241 209 1.349315 2.82006835 Bos indicus x Bos taurus 30522 Chordata Chordata 302 1.6500000000000001e-77   NTclustered gi|1542860296|ref|XR_003506133.1| 30522 g13210 i0 98.817 0.808612440191388 169 2 81 0 41 209 134 302 PREDICTED: Bos indicus x Bos taurus uncharacterized LOC113905776 (LOC113905776), ncRNA blastn 169 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
979149 979149 PRJNA998413_S_NODE_13361_length_209_cov_0.917808_g13330_i0 PRJNA998413 13361 209 0.917808 1.91821872 Oryx dammah 59534 Chordata Chordata 303 4.58e-78   NTclustered gi|2009618916|ref|XM_040233813.1| 59534 g13330 i0 92.823 1 209 15 100 0 1 209 1055 847 PREDICTED: Oryx dammah mitochondrial fission factor-like (LOC120857919), mRNA blastn 209 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Oryx Oryx dammah
979169 979169 PRJNA998413_S_NODE_2881_length_324_cov_1.279693_g2850_i0 PRJNA998413 2881 324 1.279693 4.14620532 Bos javanicus 9906 Chordata Chordata 235 2.8199999999999995e-57   NTclustered gi|2633786800|ref|XM_061393299.1| 9906 g2850 i0 88.601 139.743827160494 193 22 60 0 132 324 15188 14996 PREDICTED: Bos javanicus zinc finger protein 366 (ZNF366), transcript variant X2, mRNA blastn 45277 235 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
979174 979174 PRJNA998413_S_NODE_3301_length_312_cov_1.345382_g3270_i0 PRJNA998413 3301 312 1.345382 4.19759184 Bos taurus 9913 Chordata Chordata 577 3.89e-160   NTclustered gi|2587688346|ref|XR_009494888.1| 9913 g3270 i0 100 1 312 0 100 0 1 312 47877 48188 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132345512), ncRNA blastn 312 577 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979175 979175 PRJNA998413_S_NODE_3321_length_311_cov_1.620968_g3290_i0 PRJNA998413 3321 311 1.620968 5.04121048 Ovis aries 9940 Chordata Chordata 335 2.579999999999999e-87   NTclustered gi|2607077814|ref|XM_060404888.1| 9940 g3290 i0 86.817 6 311 27 100 3 1 311 11556 11260 PREDICTED: Ovis aries sphingomyelin synthase 1 (SGMS1), transcript variant X8, mRNA blastn 1866 335 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
979186 979186 PRJNA998413_S_NODE_4421_length_284_cov_3.325792_g4390_i0 PRJNA998413 4421 284 3.325792 9.44524928 Bos taurus 9913 Chordata Chordata 65.8 3.37e-6   NTclustered gi|2587659076|ref|XM_024982040.2| 9913 g4390 i0 100 0.246478873239437 35 0 12 0 223 257 1 35 PREDICTED: Bos taurus liprin-alpha-1-like (LOC112443149), transcript variant X1, mRNA blastn 70 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979188 979188 PRJNA998413_S_NODE_4621_length_281_cov_1.229358_g4590_i0 PRJNA998413 4621 281 1.229358 3.45449598 Sus scrofa 9823 Chordata Chordata 126 1.4999999999999998e-24   NTclustered gi|221272747|emb|CU468566.24| 9823 g4590 i0 79.592 0.697508896797153 196 25 66 7 46 230 41621 41430 Pig DNA sequence from clone CH242-289H21 on chromosome 4, complete sequence blastn 196 126 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
979189 979189 PRJNA998413_S_NODE_4681_length_280_cov_1.235023_g4650_i0 PRJNA998413 4681 280 1.235023 3.4580644 Bos indicus 9915 Chordata Chordata 507 4.58e-139   NTclustered gi|2878344139|ref|XR_011565627.1| 9915 g4650 i0 99.286 8.40357142857143 280 2 100 0 1 280 3444 3165 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139182041), ncRNA blastn 2353 507 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
979190 979190 PRJNA998413_S_NODE_4781_length_278_cov_1.246512_g4750_i0 PRJNA998413 4781 278 1.246512 3.46530336 Bos taurus 9913 Chordata Chordata 337 6.309999999999998e-88   NTclustered gi|20429385|gb|AC105306.13| 9913 g4750 i0 88.652 3.02158273381295 282 24 100 5 3 276 9534 9815 Bos taurus clone rp42-158g13, complete sequence blastn 840 337 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979194 979194 PRJNA998413_S_NODE_5041_length_274_cov_0.952607_g5010_i0 PRJNA998413 5041 274 0.952607 2.61014318 Sus scrofa 9823 Chordata Chordata 52.8 0.025   NTclustered gi|371921842|dbj|AK394269.1| 9823 g5010 i0 100 0.102189781021898 28 0 10 0 220 247 797 824 Sus scrofa mRNA, clone: LVRM10128G06, expressed in liver blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
979198 979198 PRJNA998413_S_NODE_5381_length_268_cov_2.790244_g5350_i0 PRJNA998413 5381 268 2.790244 7.47785392 Ovis canadensis 37174 Chordata Chordata 418 2.1e-112   NTclustered gi|2841478827|ref|XR_011252692.1| 37174 g5350 i0 94.776 1 268 14 100 0 1 268 229 496 PREDICTED: Ovis canadensis uncharacterized lncRNA (LOC138429111), ncRNA blastn 268 418 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis canadensis
979205 979205 PRJNA998413_S_NODE_6041_length_259_cov_1.709184_g6010_i0 PRJNA998413 6041 259 1.709184 4.42678656 Bos taurus 9913 Chordata Chordata 63.9 1.09e-5   NTclustered gi|226424009|gb|AC150675.4| 9913 g6010 i0 100 15.03861003861 34 0 13 0 1 34 117303 117336 Bos taurus BAC CH240-451M14 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence blastn 3895 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979209 979209 PRJNA998413_S_NODE_6301_length_256_cov_1.041451_g6270_i0 PRJNA998413 6301 256 1.041451 2.66611456 Bos taurus 9913 Chordata Chordata 435 1.98e-117   NTclustered gi|71060314|emb|AJ784782.1| 9913 g6270 i0 99.582 19.72265625 239 0 93 1 1 238 239 1 Bos taurus partial platelet-activating factor receptor gene, non-coding exon N blastn 5049 435 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979210 979210 PRJNA998413_S_NODE_6441_length_254_cov_1.753927_g6410_i0 PRJNA998413 6441 254 1.753927 4.45497458 Mus musculus 10090 Chordata Chordata 470 5.37e-128   NTclustered gi|74180303|dbj|AK140712.1| 10090 g6410 i0 100 43.9645669291339 254 0 100 0 1 254 758 1011 Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030007C08 product:complement component 1, q subcomponent, beta polypeptide, full insert sequence blastn 11167 470 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
979217 979217 PRJNA998413_S_NODE_6681_length_252_cov_1.063492_g6650_i0 PRJNA998413 6681 252 1.063492 2.67999984 Bos javanicus 9906 Chordata Chordata 444 3.2299999999999996e-120   NTclustered gi|2633823652|ref|XM_061404916.1| 9906 g6650 i0 98.419 108.031746031746 253 3 100 1 1 252 8663 8411 PREDICTED: Bos javanicus G protein-coupled receptor 137B (GPR137B), mRNA blastn 27224 444 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
979218 979218 PRJNA998413_S_NODE_6721_length_251_cov_2.760638_g6690_i0 PRJNA998413 6721 251 2.760638 6.92920138 Alectoris rufa 9079 Chordata Chordata 56.5 0.002   NTclustered gi|2919602537|emb|OZ238770.1| 9079 g6690 i0 100 0.231075697211155 30 0 12 0 8 37 53379494 53379523 Alectoris rufa genome assembly, chromosome: 5 blastn 58 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Alectoris Alectoris rufa
979220 979220 PRJNA998413_S_NODE_6861_length_250_cov_1.074866_g6830_i0 PRJNA998413 6861 250 1.074866 2.687165 Bos taurus 9913 Chordata Chordata 54.7 0.006   NTclustered gi|210076579|gb|AC217071.9| 9913 g6830 i0 82.258 0.248 62 11 25 0 126 187 123615 123676 Bos taurus Y Chr BAC CH240-441N1 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 62 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979223 979223 PRJNA998413_S_NODE_7061_length_248_cov_0.972973_g7030_i0 PRJNA998413 7061 248 0.972973 2.41297304 Bos taurus 9913 Chordata Chordata 453 5.2600000000000005e-123   NTclustered gi|2085583239|gb|MT145929.1| 9913 g7030 i0 99.597 1 248 1 100 0 1 248 109289 109536 Bos taurus clone LRCRPCI-42 leukocyte receptor complex locus LIB14414 genomic sequence blastn 248 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979229 979229 PRJNA998413_S_NODE_7501_length_243_cov_1.488889_g7470_i0 PRJNA998413 7501 243 1.488889 3.61800027 Bos taurus 9913 Chordata Chordata 135 2.11e-27   NTclustered gi|2587639528|ref|XR_001502008.3| 9913 g7470 i0 86.154 30.679012345679 130 13 52 4 1 126 13007 13135 PREDICTED: Bos taurus uncharacterized lncRNA (LOC107133212), ncRNA blastn 7455 135 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979233 979233 PRJNA998413_S_NODE_7921_length_239_cov_1.522727_g7890_i0 PRJNA998413 7921 239 1.522727 3.63931753 Cervus canadensis 1574408 Chordata Chordata 231 2.5699999999999997e-56   NTclustered gi|2090116100|ref|XM_043477339.1| 1574408 g7890 i0 87.94 1.65690376569038 199 20 83 2 1 198 196 1 PREDICTED: Cervus canadensis basic immunoglobulin-like variable motif-containing protein (LOC122447044), transcript variant X3, mRNA blastn 396 231 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Cervus Cervus canadensis
979237 979237 PRJNA998413_S_NODE_8061_length_238_cov_1.148571_g8030_i0 PRJNA998413 8061 238 1.148571 2.73359898 Sus scrofa 9823 Chordata Chordata 56.5 0.002   NTclustered gi|329744526|emb|CU582964.8| 9823 g8030 i0 94.595 0.390756302521008 37 0 16 2 109 145 87186 87220 Pig DNA sequence from clone CH242-171P20 on chromosome X, complete sequence blastn 93 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
979238 979238 PRJNA998413_S_NODE_8141_length_237_cov_1.810345_g8110_i0 PRJNA998413 8141 237 1.810345 4.29051765 Bos taurus 9913 Chordata Chordata 438 1.4e-118   NTclustered gi|163943543|gb|AC213446.4| 9913 g8110 i0 100 136.105485232068 237 0 100 0 1 237 47796 47560 Bos taurus Y Chr BAC CH240-14G15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 32257 438 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
979247 979247 PRJNA998413_S_NODE_9001_length_230_cov_1.203593_g8970_i0 PRJNA998413 9001 230 1.203593 2.7682639 Bos indicus 9915 Chordata Chordata 91.6 4.35e-14   NTclustered gi|2878524606|ref|XM_070788697.1| 9915 g8970 i0 89.189 4.15217391304348 74 7 32 1 11 83 11154 11227 PREDICTED: Bos indicus sterile alpha motif domain-containing protein 1-like (LOC139182972), transcript variant X2, mRNA blastn 955 91.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
979248 979248 PRJNA998413_S_NODE_9021_length_230_cov_1.131737_g8990_i0 PRJNA998413 9021 230 1.131737 2.6029951 Cervus canadensis 1574408 Chordata Chordata 281 2.41e-71   NTclustered gi|2090182432|ref|XR_006266903.1| 1574408 g8990 i0 94.972 14.1 179 9 78 0 6 184 541 363 PREDICTED: Cervus canadensis uncharacterized LOC122432628 (LOC122432628), ncRNA blastn 3243 281 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Cervus Cervus canadensis
979251 979251 PRJNA998413_S_NODE_9241_length_228_cov_1.218182_g9210_i0 PRJNA998413 9241 228 1.218182 2.77745496 Bubalus kerabau 3119969 Chordata Chordata 128 3.28e-25   NTclustered gi|2496478336|ref|XM_055575688.1| 3119969 g9210 i0 84.058 27.6710526315789 138 17 61 2 14 151 3714 3582 PREDICTED: Bubalus kerabau DBF4B-CDC7 kinase regulatory subunit (DBF4B), transcript variant X1, mRNA blastn 6309 128 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
979252 979252 PRJNA998413_S_NODE_9261_length_228_cov_1.218182_g9230_i0 PRJNA998413 9261 228 1.218182 2.77745496 Sus scrofa 9823 Chordata Chordata 143 1.17e-29   NTclustered gi|224762785|emb|CU407122.4| 9823 g9230 i0 78.97 20.8421052631579 233 32 100 14 1 228 116890 116670 Pig DNA sequence from clone CH242-52A15 on chromosome X, complete sequence blastn 4752 143 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
979258 979258 PRJNA998413_S_NODE_9601_length_225_cov_1.253086_g9570_i0 PRJNA998413 9601 225 1.253086 2.8194435 Bubalus kerabau 3119969 Chordata Chordata 311 2.99e-80   NTclustered gi|2496509076|ref|XR_008717855.1| 3119969 g9570 i0 91.964 179.435555555556 224 15 99 2 1 224 6325 6105 PREDICTED: Bubalus kerabau leucine rich single-pass membrane protein 1 (LSMEM1), transcript variant X3, misc_RNA blastn 40373 311 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
1273974 1273974 PRJNA998413_S_NODE_12421_length_212_cov_0.899329_g12390_i0 PRJNA998413 12421 212 0.899329 1.90657748 Delphinidae 9726 Chordata Chordata 141 3.87e-29   NTclustered gi|1835194313|ref|XR_002176496.2| 9739 g12390 i0 83.333 15.2264150943396 156 22 73 4 56 210 4102 4254 PREDICTED: Tursiops truncatus uncharacterized LOC109550124 (LOC109550124), transcript variant X9, misc_RNA blastn 3228 141 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Tursiops Tursiops truncatus
1273975 1273975 PRJNA998413_S_NODE_12461_length_212_cov_0.818792_g12430_i0 PRJNA998413 12461 212 0.818792 1.7358390400000001 Bos 9903 Chordata Chordata 257 3.68e-64   NTclustered gi|2878467903|ref|XR_011563078.1| 9915 g12430 i0 88.636 723.716981132075 220 13 99 3 3 211 41399 41617 PREDICTED: Bos indicus autophagy related 7 (ATG7), transcript variant X18, misc_RNA blastn 153428 259 0.992277992277992 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
1273976 1273976 PRJNA998413_S_NODE_12901_length_210_cov_1.367347_g12870_i0 PRJNA998413 12901 210 1.367347 2.8714287 Bos 9903 Chordata Chordata 124 3.85e-24   NTclustered gi|210147626|gb|AC175128.5| 9913 g12870 i0 85.95 113.433333333333 121 11 55 4 95 210 99186 99305 Bos taurus Y Chr BAC CH240-459J2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 23821 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1273979 1273979 PRJNA998413_S_NODE_4141_length_290_cov_1.026432_g4110_i0 PRJNA998413 4141 290 1.026432 2.9766528 Artiodactyla 91561 Chordata Chordata 75 5.73e-9   NTclustered gi|2633755019|ref|XM_061387101.1| 9906 g4110 i0 97.674 8.57241379310345 43 1 15 0 248 290 33 75 PREDICTED: Bos javanicus ATP binding cassette subfamily C member 11 (ABCC11), transcript variant X1, mRNA blastn 2486 75 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1273984 1273984 PRJNA998413_S_NODE_6141_length_258_cov_1.015385_g6110_i0 PRJNA998413 6141 258 1.015385 2.6196933 Artiodactyla 91561 Chordata Chordata 108 4.94e-19   NTclustered gi|226510601|gb|AC150488.4| 9913 g6110 i0 95.588 30.3023255813953 68 2 26 1 192 258 47547 47614 Bos taurus BAC CH240-466B8 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence blastn 7818 108 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1273986 1273986 PRJNA998413_S_NODE_6661_length_252_cov_1.068783_g6630_i0 PRJNA998413 6661 252 1.068783 2.69333316 Bovidae 9895 Chordata Chordata 159 1.31e-34   NTclustered gi|2587918737|tpg|BK064707.1| 9913 g6630 i0 95.146 58.5952380952381 103 2 81 1 153 252 2063813 2063711 TPA: Bos taurus breed Hereford TRA/TRD locus blastn 14766 159 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1273987 1273987 PRJNA998413_S_NODE_7741_length_241_cov_1.129213_g7710_i0 PRJNA998413 7741 241 1.129213 2.72140333 Artiodactyla 91561 Chordata Chordata 115 2.73e-21   NTclustered gi|2102097491|ref|XM_043907096.1| 9860 g7710 i0 95.775 32.0622406639004 71 3 29 0 171 241 1248 1178 PREDICTED: Cervus elaphus HLA class II histocompatibility antigen, DM beta chain (LOC122696919), mRNA blastn 7727 115 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Cervus Cervus elaphus
1273989 1273989 PRJNA998413_S_NODE_8481_length_234_cov_1.713450_g8450_i0 PRJNA998413 8481 234 1.71345 4.009473 Artiodactyla 91561 Chordata Chordata 115 2.64e-21   NTclustered gi|2587620481|ref|XR_009494864.1| 9913 g8450 i0 95.775 33.7863247863248 71 3 30 0 164 234 2411 2481 PREDICTED: Bos taurus G protein-coupled receptor 15 (GPR15), transcript variant X2, misc_RNA blastn 7906 115 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2254313 2254313 PRJNA998413_S_NODE_10522_length_219_cov_1.288462_g10491_i0 PRJNA998413 10522 219 1.288462 2.82173178 Canis lupus 9612 Chordata Chordata 182 2.37e-41   NTclustered gi|167900539|gb|AC205310.5| 9615 g10491 i0 83.5 0.91324200913242 200 27 91 3 1 200 94843 94650 Canis familiaris, clone XX-459P12, complete sequence blastn 200 182 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
2254318 2254318 PRJNA998413_S_NODE_10842_length_217_cov_1.142857_g10811_i0 PRJNA998413 10842 217 1.142857 2.47999969 Bos javanicus 9906 Chordata Chordata 388 1.29e-103   NTclustered gi|2633679491|ref|XR_009735280.1| 9906 g10811 i0 99.078 2 217 1 100 1 1 217 16118 16333 PREDICTED: Bos javanicus uncharacterized LOC133244060 (LOC133244060), transcript variant X2, ncRNA blastn 434 388 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2254325 2254325 PRJNA998413_S_NODE_11122_length_216_cov_1.098039_g11091_i0 PRJNA998413 11122 216 1.098039 2.37176424 Bubalus kerabau 3119969 Chordata Chordata 351 1.68e-92   NTclustered gi|2496388577|ref|XR_008714484.1| 3119969 g11091 i0 96.296 1 216 5 100 2 1 216 10539 10751 PREDICTED: Bubalus kerabau uncharacterized LOC129651986 (LOC129651986), transcript variant X4, ncRNA blastn 216 351 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
2254327 2254327 PRJNA998413_S_NODE_11342_length_215_cov_1.763158_g11311_i0 PRJNA998413 11342 215 1.763158 3.7907897 Bos taurus 9913 Chordata Chordata 392 9.83e-105   NTclustered gi|285026537|gb|AC233219.4| 9913 g11311 i0 99.535 146.502325581395 215 1 100 0 1 215 19943 20157 Bos taurus Y Chr BAC CH240-288O15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 31498 392 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2254329 2254329 PRJNA998413_S_NODE_11422_length_215_cov_0.881579_g11391_i0 PRJNA998413 11422 215 0.881579 1.89539485 Mus musculus 10090 Chordata Chordata 398 2.1099999999999997e-106   NTclustered gi|1314817976|ref|NM_001359016.1| 10090 g11391 i0 100 24.906976744186 215 0 100 0 1 215 1295 1081 Mus musculus SPARC-like 1 (Sparcl1), transcript variant 2, mRNA blastn 5355 398 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
2254331 2254331 PRJNA998413_S_NODE_11462_length_215_cov_0.881579_g11431_i0 PRJNA998413 11462 215 0.881579 1.89539485 Bos indicus 9915 Chordata Chordata 335 1.6799999999999993e-87   NTclustered gi|2878523814|ref|XM_070788483.1| 9915 g11431 i0 98.936 0.874418604651163 188 1 87 1 1 187 2100 2287 PREDICTED: Bos indicus RNA binding motif protein 33 (RBM33), transcript variant X15, mRNA blastn 188 335 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
2254335 2254335 PRJNA998413_S_NODE_11762_length_214_cov_0.887417_g11731_i0 PRJNA998413 11762 214 0.887417 1.89907238 Capra hircus 9925 Chordata Chordata 298 2.19e-76   NTclustered gi|1062868424|ref|XM_013966944.2| 9925 g11731 i0 92.453 1.91121495327103 212 10 99 3 4 214 670 876 PREDICTED: Capra hircus tetratricopeptide repeat domain 5 (TTC5), transcript variant X1, mRNA blastn 409 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Capra Capra hircus
2254337 2254337 PRJNA998413_S_NODE_11822_length_214_cov_0.887417_g11791_i0 PRJNA998413 11822 214 0.887417 1.89907238 Mus musculus 10090 Chordata Chordata 385 1.64e-102   NTclustered gi|82779886|gb|AC155316.6| 10090 g11791 i0 99.065 12.9065420560748 214 2 100 0 1 214 35034 35247 Mus musculus BAC clone RP23-181P9 from chromosome 5, complete sequence blastn 2762 385 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
2254340 2254340 PRJNA998413_S_NODE_12002_length_213_cov_0.966667_g11971_i0 PRJNA998413 12002 213 0.966667 2.05900071 Bos taurus 9913 Chordata Chordata 267 6.149999999999999e-67   NTclustered gi|2587617871|ref|XR_009493695.1| 9913 g11971 i0 89.252 319.164319248826 214 21 100 2 1 213 281 493 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344746), ncRNA blastn 67982 267 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2254344 2254344 PRJNA998413_S_NODE_12282_length_212_cov_1.348993_g12251_i0 PRJNA998413 12282 212 1.348993 2.85986516 Odocoileus virginianus 9874 Chordata Chordata 93.5 1.1e-14   NTclustered gi|2871653962|ref|XR_011490435.1| 9874 g12251 i0 90.141 1.25943396226415 71 7 33 0 1 71 4550 4620 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139037549), transcript variant X2, ncRNA blastn 267 93.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
2254347 2254347 PRJNA998413_S_NODE_12442_length_212_cov_0.899329_g12411_i0 PRJNA998413 12442 212 0.899329 1.90657748 Physeter macrocephalus 9755 Chordata Chordata 117 6.52e-22   NTclustered gi|2487049219|ref|XM_055090261.1| 9755 g12411 i0 95.833 33.7216981132075 72 3 34 0 141 212 1906 1977 PREDICTED: Physeter macrocephalus PRKR interacting protein 1 (PRKRIP1), transcript variant X1, mRNA blastn 7149 117 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Physeteridae Physeter Physeter macrocephalus
2254348 2254348 PRJNA998413_S_NODE_12522_length_211_cov_1.993243_g12491_i0 PRJNA998413 12522 211 1.993243 4.20574273 Bos taurus 9913 Chordata Chordata 390 3.459999999999999e-104   NTclustered gi|166706539|gb|AC216977.3| 9913 g12491 i0 100 156.312796208531 211 0 100 0 1 211 29239 29029 Bos taurus Y Chr BAC CH240-364L2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 32982 390 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2254352 2254352 PRJNA998413_S_NODE_12662_length_211_cov_0.905405_g12631_i0 PRJNA998413 12662 211 0.905405 1.91040455 Bos taurus 9913 Chordata Chordata 143 1.07e-29   NTclustered gi|21425595|emb|AJ421481.1| 9913 g12631 i0 86.667 61.8720379146919 135 10 64 4 77 210 35324 35197 Bos taurus X-inactivation center region, Jpx and Xist genes blastn 13055 143 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2254353 2254353 PRJNA998413_S_NODE_12682_length_211_cov_0.905405_g12651_i0 PRJNA998413 12682 211 0.905405 1.91040455 Ovis aries 9940 Chordata Chordata 143 1.07e-29   NTclustered gi|2606978821|ref|XR_009596486.1| 9940 g12651 i0 86.029 68.5118483412322 136 16 64 3 53 186 28219 28353 PREDICTED: Ovis aries uncharacterized LOC121818846 (LOC121818846), transcript variant X1, ncRNA blastn 14456 143 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
2254355 2254355 PRJNA998413_S_NODE_12882_length_210_cov_1.374150_g12851_i0 PRJNA998413 12882 210 1.37415 2.885715 Bos indicus 9915 Chordata Chordata 316 5.92e-82   NTclustered gi|2878380286|ref|XM_070800608.1| 9915 g12851 i0 93.81 1164.4380952381 210 13 100 0 1 210 30704 30495 PREDICTED: Bos indicus KLF transcription factor 12 (KLF12), transcript variant X2, mRNA blastn 244532 316 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
2254359 2254359 PRJNA998413_S_NODE_13022_length_210_cov_0.911565_g12991_i0 PRJNA998413 13022 210 0.911565 1.9142865 Moschus berezovskii 68408 Chordata Chordata 267 6.05e-67   NTclustered gi|2492339634|ref|XM_055433359.1| 68408 g12991 i0 94.318 2.51428571428571 176 7 84 2 35 210 5234 5406 PREDICTED: Moschus berezovskii high mobility group nucleosomal binding domain 3 (HMGN3), transcript variant X3, mRNA blastn 528 267 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
2254361 2254361 PRJNA998413_S_NODE_13062_length_210_cov_0.911565_g13031_i0 PRJNA998413 13062 210 0.911565 1.9142865 Mus musculus 10090 Chordata Chordata 124 3.85e-24   NTclustered gi|37693674|gb|AC121082.13| 10090 g13031 i0 79.459 2.39047619047619 185 31 87 5 1 183 192993 192814 Mus musculus chromosome 7, clone RP23-32F14, complete sequence blastn 502 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
2254365 2254365 PRJNA998413_S_NODE_13322_length_209_cov_0.917808_g13291_i0 PRJNA998413 13322 209 0.917808 1.91821872 Odocoileus virginianus 9874 Chordata Chordata 124 3.83e-24   NTclustered gi|2871702871|ref|XM_070457432.1| 9874 g13291 i0 84.921 42.7655502392345 126 15 59 4 1 124 3641 3764 PREDICTED: Odocoileus virginianus VPS37C subunit of ESCRT-I (VPS37C), transcript variant X4, mRNA blastn 8938 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
2254366 2254366 PRJNA998413_S_NODE_13342_length_209_cov_0.917808_g13311_i0 PRJNA998413 13342 209 0.917808 1.91821872 Bos javanicus 9906 Chordata Chordata 243 1.01e-59   NTclustered gi|2633737795|ref|XR_009729859.1| 9906 g13311 i0 87.619 2.70334928229665 210 24 99 2 2 209 319 110 PREDICTED: Bos javanicus uncharacterized LOC133227547 (LOC133227547), ncRNA blastn 565 243 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2254367 2254367 PRJNA998413_S_NODE_13422_length_209_cov_0.815068_g13391_i0 PRJNA998413 13422 209 0.815068 1.70349212 Ovis aries 9940 Chordata Chordata 298 2.13e-76   NTclustered gi|2607048533|ref|XR_009599233.1| 9940 g13391 i0 93.137 111.928229665072 204 13 97 1 1 203 15931 16134 PREDICTED: Ovis aries uncharacterized LOC105607964 (LOC105607964), transcript variant X3, ncRNA blastn 23393 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
2254371 2254371 PRJNA998413_S_NODE_1502_length_395_cov_1.554217_g1471_i0 PRJNA998413 1502 395 1.554217 6.13915715 Bos taurus 9913 Chordata Chordata 713 0   NTclustered gi|197322348|gb|AC164336.3| 9913 g1471 i0 99.241 148 395 3 100 0 1 395 87810 88204 Bos taurus Y Chr BAC CH240-150I5 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 58460 713 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2254376 2254376 PRJNA998413_S_NODE_1902_length_367_cov_1.486842_g1871_i0 PRJNA998413 1902 367 1.486842 5.45671014 Bos taurus 9913 Chordata Chordata 621 2.12e-173   NTclustered gi|1068294018|gb|KX592814.1| 9913 g1871 i0 97.275 172.910081743869 367 9 100 1 1 367 10431018 10430653 Bos taurus isolate Dominette_000065F genomic sequence blastn 63458 621 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2254384 2254384 PRJNA998413_S_NODE_2542_length_335_cov_3.650735_g2511_i0 PRJNA998413 2542 335 3.650735 12.22996225 Bos indicus 9915 Chordata Chordata 566 9.119999999999997e-157   NTclustered gi|2878483132|ref|XM_070779261.1| 9915 g2511 i0 97.297 4.45970149253731 333 9 99 0 1 333 2473 2805 PREDICTED: Bos indicus liprin-alpha-1-like (LOC139179640), transcript variant X1, mRNA blastn 1494 566 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
2254406 2254406 PRJNA998413_S_NODE_4102_length_291_cov_1.758772_g4071_i0 PRJNA998413 4102 291 1.758772 5.11802652 Odocoileus virginianus 9874 Chordata Chordata 110 1.58e-19   NTclustered gi|2871653160|ref|XR_011490370.1| 9874 g4071 i0 89.535 27.6838487972509 86 9 30 0 16 101 2056 1971 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139037506), ncRNA blastn 8056 110 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
2254408 2254408 PRJNA998413_S_NODE_4282_length_287_cov_1.196429_g4251_i0 PRJNA998413 4282 287 1.196429 3.43375123 Pseudorca crassidens 82174 Chordata Chordata 110 1.55e-19   NTclustered gi|563785744|dbj|AP009342.1| 82174 g4251 i0 83.471 37.2020905923345 121 17 42 3 6 125 142482 142600 Pseudorca crassidens DNA, BAC clone: QGB1-160F10, complete sequence blastn 10677 110 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
2254411 2254411 PRJNA998413_S_NODE_4562_length_282_cov_1.136986_g4531_i0 PRJNA998413 4562 282 1.136986 3.20630052 Bos indicus 9915 Chordata Chordata 411 3.729999999999999e-110   NTclustered gi|2878344144|ref|XR_011565629.1| 9915 g4531 i0 99.556 19.6985815602837 225 1 80 0 58 282 2703 2479 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139182043), ncRNA blastn 5555 411 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
2254413 2254413 PRJNA998413_S_NODE_4782_length_278_cov_1.246512_g4751_i0 PRJNA998413 4782 278 1.246512 3.46530336 Bos indicus x Bos taurus 30522 Chordata Chordata 484 2.1299999999999994e-132   NTclustered gi|1542891161|ref|XR_003515033.1| 30522 g4751 i0 98.201 3 278 4 100 1 1 278 3818 3542 PREDICTED: Bos indicus x Bos taurus uncharacterized LOC113906916 (LOC113906916), transcript variant X4, ncRNA blastn 834 484 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
2254417 2254417 PRJNA998413_S_NODE_5042_length_274_cov_0.947867_g5011_i0 PRJNA998413 5042 274 0.947867 2.59715558 Phocoena sinus 42100 Chordata Chordata 283 8.2e-72   NTclustered gi|1814765391|ref|XM_032648002.1| 42100 g5011 i0 86.347 32.970802919708 271 24 98 11 1 268 1017 1277 PREDICTED: Phocoena sinus ER membrane protein complex subunit 3 (EMC3), transcript variant X3, mRNA blastn 9034 283 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Phocoenidae Phocoena Phocoena sinus
2254426 2254426 PRJNA998413_S_NODE_5542_length_266_cov_0.990148_g5511_i0 PRJNA998413 5542 266 0.990148 2.63379368 Bubalus kerabau 3119969 Chordata Chordata 152 2.33e-32   NTclustered gi|2496515598|ref|XM_055562967.1| 3119969 g5511 i0 100 0.308270676691729 82 0 31 0 1 82 213 294 PREDICTED: Bubalus kerabau calcium/calmodulin dependent serine protein kinase (CASK), transcript variant X7, mRNA blastn 82 152 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
2254437 2254437 PRJNA998413_S_NODE_6482_length_254_cov_0.937173_g6451_i0 PRJNA998413 6482 254 0.937173 2.38041942 Pseudorca crassidens 82174 Chordata Chordata 137 6.19e-28   NTclustered gi|2791920470|ref|XR_010942877.1| 82174 g6451 i0 87.5 8.42125984251969 120 14 47 1 1 119 5438 5319 PREDICTED: Pseudorca crassidens uncharacterized lncRNA (LOC137223443), transcript variant X1, ncRNA blastn 2139 137 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
2254441 2254441 PRJNA998413_S_NODE_6802_length_250_cov_3.475936_g6771_i0 PRJNA998413 6802 250 3.475936 8.68984 Bos javanicus 9906 Chordata Chordata 394 3.27e-105   NTclustered gi|2633832975|ref|XM_061407453.1| 9906 g6771 i0 95.219 1094.168 251 9 100 3 1 250 3454 3206 PREDICTED: Bos javanicus uncharacterized LOC133241636 (LOC133241636), mRNA blastn 273542 394 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2254450 2254450 PRJNA998413_S_NODE_7282_length_245_cov_2.829670_g7251_i0 PRJNA998413 7282 245 2.82967 6.9326915 Moschus berezovskii 68408 Chordata Chordata 364 2.5e-96   NTclustered gi|2492329010|ref|XM_055428551.1| 68408 g7251 i0 93.827 0.991836734693878 243 13 99 2 3 245 862 622 PREDICTED: Moschus berezovskii uncharacterized LOC129557882 (LOC129557882), transcript variant X3, mRNA blastn 243 364 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
2254451 2254451 PRJNA998413_S_NODE_7322_length_245_cov_1.472527_g7291_i0 PRJNA998413 7322 245 1.472527 3.60769115 Ovis aries 9940 Chordata Chordata 387 5.34e-103   NTclustered gi|2607253502|ref|XM_027970504.3| 9940 g7291 i0 95.102 1 245 12 100 0 1 245 2233 2477 PREDICTED: Ovis aries transmembrane protein 161B (TMEM161B), transcript variant X7, mRNA blastn 245 387 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;