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contig_metadata

11 rows where bioproject = "PRJNA998413" and tax_phylum = "Bacteroidota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA998413 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2254393 2254393 PRJNA998413_S_NODE_3142_length_316_cov_3.849802_g3111_i0 PRJNA998413 3142 316 3.849802 12.16537432 Flavobacterium dauae 1563479 Bacteria Bacteria 56.5 0.002   NTclustered gi|2557430891|gb|CP130821.1| 1563479 g3111 i0 100 0.0949367088607595 30 0 9 0 47 76 1161438 1161409 Flavobacterium dauae strain TCH3-2 chromosome, complete genome blastn 30 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium dauae
8632312 8632312 PRJNA998413_S_NODE_7587_length_242_cov_1.871508_g7556_i0 PRJNA998413 7587 242 1.871508 4.52904936 Flectobacillus roseus 502259 Bacteria Bacteria 156 4.51e-43   NR WP_283346397.1 502259 g7556 i0 100 0.991735537190083 80 0 99.2 0 242 3 381 460 WP_283346397.1 dihydroxy-acid dehydratase [Flectobacillus roseus] diamond 240 156 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus roseus
13732744 13732744 PRJNA998413_S_NODE_9851_length_223_cov_1.575000_g9820_i0 PRJNA998413 9851 223 1.575 3.51225 Flavobacterium cerinum 2502784 Bacteria Bacteria 379 7.999999999999999e-101   NTclustered gi|2279330881|gb|CP101751.1| 2502784 g9820 i0 97.309 1.30044843049327 223 6 100 0 1 223 463261 463483 Flavobacterium cerinum strain C1 chromosome, complete genome blastn 290 379 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium cerinum
19125307 19125307 PRJNA998413_S_NODE_5375_length_268_cov_3.697561_g5344_i0 PRJNA998413 5375 268 3.697561 9.90946348 Flavobacterium 237 Bacteria Bacteria 496 9.429999999999999e-136   NTclustered gi|2279330881|gb|CP101751.1| 2502784 g5344 i0 100 623.007462686567 268 0 100 0 1 268 717834 718101 Flavobacterium cerinum strain C1 chromosome, complete genome blastn 166966 496 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium cerinum
20105721 20105721 PRJNA998413_S_NODE_5276_length_270_cov_0.971014_g5245_i0 PRJNA998413 5276 270 0.971014 2.6217378 Chitinophagaceae bacterium LGM1 2837399 Bacteria Bacteria 350 7.84e-92   NTclustered gi|2046997110|gb|CP075895.1| 2837399 g5245 i0 91.732 280.844444444444 254 17 97 4 18 270 1076632 1076382 Chitinophagaceae bacterium LGM1 chromosome, complete genome blastn 75828 350 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium LGM1
23931573 23931573 PRJNA998413_S_NODE_3299_length_312_cov_1.357430_g3268_i0 PRJNA998413 3299 312 1.35743 4.2351816 Candidatus Fluviicola riflensis 1798018 Bacteria Bacteria 431 3.21e-116   NTclustered gi|1229046090|gb|CP022585.1| 1798018 g3268 i0 91.64 246.605769230769 311 26 99 0 1 311 786699 786389 Candidatus Fluviicola riflensis chromosome, complete genome blastn 76941 431 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Crocinitomicaceae Fluviicola Candidatus Fluviicola riflensis
28605609 28605609 PRJNA998413_S_NODE_12307_length_212_cov_1.114094_g12276_i0 PRJNA998413 12307 212 1.114094 2.36187928 Petrimonas sp. 2023866 Bacteria Bacteria 79.7 8.69e-16   NR MDD3787514.1 2023866 g12276 i0 71.7 0.849056603773585 60 13 84.9 1 184 5 1 56 MDD3787514.1 TIM barrel protein [Petrimonas sp.] diamond 180 79.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Dysgonomonadaceae Petrimonas Petrimonas sp.
30626696 30626696 PRJNA998413_S_NODE_11073_length_216_cov_1.313725_g11042_i0 PRJNA998413 11073 216 1.313725 2.837646 Prevotella sp. tc2-28 1761888 Bacteria Bacteria 130 2.49e-34   NR WP_091958264.1 1761888 g11042 i0 87.3 7.90277777777778 71 9 98.6 0 215 3 9 79 WP_091958264.1 aminopeptidase C [Prevotella sp. tc2-28] diamond 1707 130 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp. tc2-28
32049556 32049556 PRJNA998413_S_NODE_11778_length_214_cov_0.887417_g11747_i0 PRJNA998413 11778 214 0.887417 1.89907238 Saprospiraceae bacterium 2202734 Bacteria Bacteria 42.7 0.0267   NR MBX2872287.1 2202734 g11747 i0 31.5 0.757009345794392 54 37 75.7 0 34 195 1077 1130 MBX2872287.1 carboxypeptidase-like regulatory domain-containing protein [Saprospiraceae bacterium] diamond 162 42.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium
32650054 32650054 PRJNA998413_S_NODE_12420_length_212_cov_0.899329_g12389_i0 PRJNA998413 12420 212 0.899329 1.90657748 Bacteroidales bacterium 2030927 Bacteria Bacteria 109 1.16e-29   NR NLY23810.1 2030927 g12389 i0 89.8 2.50471698113208 59 6 83.5 0 1 177 14 72 NLY23810.1 hypothetical protein [Bacteroidales bacterium] diamond 531 109 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
32902139 32902139 PRJNA998413_S_NODE_12060_length_213_cov_0.893333_g12029_i0 PRJNA998413 12060 213 0.893333 1.90279929 Bacteroidales bacterium 2030927 Bacteria Bacteria 45.8 0.00197   NR MFA6199038.1 2030927 g12029 i0 40.7 0.830985915492958 59 35 83.1 0 36 212 240 298 MFA6199038.1 hypothetical protein [Bacteroidales bacterium] diamond 177 45.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;