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contig_metadata

9 rows where bioproject = "PRJNA998413" and tax_clade = "Sar"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA998413 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
979176 979176 PRJNA998413_S_NODE_3341_length_310_cov_8.672065_g3310_i0 PRJNA998413 3341 310 8.672065 26.8834015 Develorapax marinus 1892415 SAR_Eukaryotes SAR_Eukaryotes 298 3.37e-76   NTclustered gi|1059048665|gb|KX500026.1| 1892415 g3310 i0 84.566 100.935483870968 311 37 99 10 1 306 305 1 Develorapax marinus isolate Colp-4a 28S ribosomal RNA gene, partial sequence blastn 31290 298 1 Eukaryota Sar     Developea   Developayellaceae Develorapax Develorapax marinus
4807159 4807159 PRJNA998413_S_NODE_6904_length_249_cov_2.521505_g6873_i0 PRJNA998413 6904 249 2.521505 6.27854745 Caryotricha minuta 1004043 SAR_Eukaryotes SAR_Eukaryotes 195 3.5399999999999996e-45   NTclustered gi|759083508|gb|KM222125.1| 1004043 g6873 i0 84.615 29.2771084337349 195 30 78 0 55 249 1076 1270 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 7290 195 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta
8926823 8926823 PRJNA998413_S_NODE_12827_length_210_cov_2.482993_g12796_i0 PRJNA998413 12827 210 2.482993 5.2142853 Chrysophyceae 2825 SAR_Eukaryotes SAR_Eukaryotes 104 5.02e-18   NTclustered gi|219903754|emb|FM955257.1| 2996 g12796 i0 82.114 52.8333333333333 123 20 59 2 66 188 2013 1893 Hydrurus foetidus partial 28S rRNA gene blastn 11095 104 1 Eukaryota Sar     Chrysophyceae Hydrurales Hydruraceae Hydrurus Hydrurus foetidus
9907372 9907372 PRJNA998413_S_NODE_6188_length_257_cov_1.953608_g6157_i0 PRJNA998413 6188 257 1.953608 5.02077256 Colponema vietnamica 1492817 SAR_Eukaryotes SAR_Eukaryotes 115 2.9400000000000003e-21   NTclustered gi|567569737|gb|KF651080.1| 1492817 g6157 i0 91.667 32.0661478599222 84 6 33 1 1 84 2635 2717 Colponema vietnamica strain Colp-7a 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8241 115 1 Eukaryota Sar       Colponemida Colponemidia Colponema Colponema vietnamica
11182445 11182445 PRJNA998413_S_NODE_209_length_736_cov_6.967311_g183_i0 PRJNA998413 209 736 6.967311 51.27940896 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 1308 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g183 i0 98.776 806.669836956522 735 9 99 0 2 736 1201 467 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 593709 1308 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
15007021 15007021 PRJNA998413_S_NODE_2692_length_330_cov_3.513109_g2661_i0 PRJNA998413 2692 330 3.513109 11.5932597 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 566 8.97e-157   NTclustered gi|512134949|gb|JX178908.1| 1295638 g2661 i0 97.576 98.4181818181818 330 8 100 0 1 330 1384 1055 Vorticella sp. 4 JG-2011 clone 8 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 32478 566 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
27974130 27974130 PRJNA998413_S_NODE_9225_length_228_cov_1.624242_g9194_i0 PRJNA998413 9225 228 1.624242 3.70327176 Symbiodinium sp. KB8 230985 SAR_Eukaryotes SAR_Eukaryotes 62.4 1.39e-9   NR CAE7845595.1 230985 g9194 i0 58.9 0.736842105263158 56 23 73.7 0 218 51 163 218 CAE7845595.1 RPL6 [Symbiodinium sp. KB8] diamond 168 62.4 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium sp. KB8
29963405 29963405 PRJNA998413_S_NODE_3431_length_308_cov_1.914286_g3400_i0 PRJNA998413 3431 308 1.914286 5.89600088 Symbiodinium sp. KB8 230985 SAR_Eukaryotes SAR_Eukaryotes 134 4.86e-35   NR CAE7914721.1 230985 g3400 i0 62.4 0.983766233766234 101 38 98.4 0 306 4 303 403 CAE7914721.1 NME7 [Symbiodinium sp. KB8] diamond 303 134 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium sp. KB8
31738912 31738912 PRJNA998413_S_NODE_11377_length_215_cov_1.322368_g11346_i0 PRJNA998413 11377 215 1.322368 2.8430912 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 100 1.41e-23   NR KAG1704188.1 4784 g11346 i0 70.4 11.9720930232558 71 19 96.3 1 213 7 248 318 KAG1704188.1 hypothetical protein DVH05_006198 [Phytophthora capsici] diamond 2574 101 0.99009900990099 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;