RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA998413", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA998413 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30343018 30343018 PRJNA998413_S_NODE_5732_length_263_cov_2.615000_g5701_i0 PRJNA998413 5732 263 2.615 6.87745 Orbicella faveolata 48498 Cnidaria other_Eukaryota 114 2.29e-30   NR XP_020631066.1 48498 g5701 i0 71.3 3.87832699619772 87 25 99.2 0 3 263 57 143 XP_020631066.1 40S ribosomal protein S25-like [Orbicella faveolata] diamond 1020 114 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
30689938 30689938 PRJNA998413_S_NODE_5013_length_274_cov_1.725118_g4982_i0 PRJNA998413 5013 274 1.725118 4.72682332 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 43.9 0.0206   NR XP_065058861.1 499914 g4982 i0 32.1 0.854014598540146 78 47 85.4 2 24 257 118 189 XP_065058861.1 coiled-coil domain-containing protein 22 homolog [Rhopilema esculentum] diamond 234 43.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;