RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA994052", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA994052 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28479325 28479325 PRJNA994052_P_NODE_27646_length_288_cov_9.223256_g26405_i0 PRJNA994052 27646 288 9.223256 26.56297728 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 47.8 0.00108   NR MEM4168000.1 2972665 g26405 i0 54.8 0.875 42 19 43.8 0 286 161 411 452 MEM4168000.1 hypothetical protein [Candidatus Caldarchaeum sp.] diamond 252 47.8 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
32207871 32207871 PRJNA994052_P_NODE_70058_length_212_cov_54.870504_g68802_i0 PRJNA994052 70058 212 54.870504 116.32546848 Nitrosarchaeum sp. 2026886 Archaea Archaea 45.1 0.00383   NR NJL44544.1 2026886 g68802 i0 34.4 0.863207547169811 61 40 86.3 0 18 200 197 257 NJL44544.1 hypothetical protein [Nitrosarchaeum sp.] diamond 183 45.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;