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contig_metadata

11 rows where bioproject = "PRJNA994052" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 11 ✖

bioproject 1

  • PRJNA994052 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976630 976630 PRJNA994052_P_NODE_57781_length_229_cov_41.897436_g56525_i0 PRJNA994052 57781 229 41.897436 95.94512844 Halococcus dombrowskii 179637 Archaea Archaea 374 3.8399999999999996e-99   NTclustered gi|2221489803|gb|CP095005.1| 179637 g56525 i0 96.07 4.93886462882096 229 9 100 0 1 229 871094 870866 Halococcus dombrowskii strain H4 chromosome, complete genome blastn 1131 374 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
14027122 14027122 PRJNA994052_P_NODE_79831_length_201_cov_7.937500_g78574_i0 PRJNA994052 79831 201 7.9375 15.954375 Halobaculum 43927 Archaea Archaea 331 2.01e-86   NTclustered gi|2511735787|gb|CP126156.1| 3031998 g78574 i0 96.954 22.2039800995025 197 6 98 0 2 198 1519652 1519848 Halobaculum litoreum strain DT92 chromosome, complete genome blastn 4463 331 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum litoreum
16575745 16575745 PRJNA994052_P_NODE_48933_length_243_cov_10.011765_g47681_i0 PRJNA994052 48933 243 10.011765 24.32858895 Halobacteriales 2235 Archaea Archaea 132 2.7300000000000003e-26   NTclustered gi|2168244610|gb|CP089468.1| 223182 g47681 i0 93.258 7.72839506172839 89 6 37 0 2 90 2317265 2317353 Halobacterium noricense strain JCM 15102 chromosome, complete genome blastn 1878 132 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium noricense
20103110 20103110 PRJNA994052_P_NODE_55796_length_232_cov_29.352201_g54541_i0 PRJNA994052 55796 232 29.352201 68.09710632 Halorubrum salinarum 2739057 Archaea Archaea 283 6.76e-72   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g54541 i0 89.427 7.84913793103448 227 20 97 4 4 228 580219 580443 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 1821 283 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum
22653560 22653560 PRJNA994052_P_NODE_42518_length_254_cov_6.613260_g41271_i0 PRJNA994052 42518 254 6.61326 16.7976804 Halococcus qingdaonensis 224402 Archaea Archaea 459 1.1599999999999999e-124   NTclustered gi|2281256326|gb|CP101943.1| 224402 g41271 i0 99.213 108.322834645669 254 2 100 0 1 254 1948811 1949064 Halococcus qingdaonensis strain CGMCC 1.4243 chromosome, complete genome blastn 27514 459 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus qingdaonensis
23928655 23928655 PRJNA994052_P_NODE_15959_length_312_cov_22.677824_g14738_i0 PRJNA994052 15959 312 22.677824 70.75481088 Halobellus inordinatus 1126236 Archaea Archaea 159 1.67e-34   NTclustered gi|2279714123|gb|CP101825.1| 1126236 g14738 i0 86.713 2.375 143 19 46 0 162 304 2163824 2163966 Halobellus inordinatus strain DSM 26177 chromosome, complete genome blastn 741 159 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus Halobellus inordinatus
27152456 27152456 PRJNA994052_P_NODE_47702_length_245_cov_9.244186_g46451_i0 PRJNA994052 47702 245 9.244186 22.6482557 Methanobacterium sp. 2164 Archaea Archaea 58.5 8.11e-8   NR MEN6294369.1 2164 g46451 i0 34.5 1.42040816326531 116 39 96.7 1 5 241 80 195 MEN6294369.1 hypothetical protein [Methanobacterium sp.] diamond 348 58.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
28510862 28510862 PRJNA994052_P_NODE_72787_length_209_cov_16.536765_g71531_i0 PRJNA994052 72787 209 16.536765 34.56183885 Methanoculleus sp. 90427 Archaea Archaea 114 4.01e-28   NR WP_292561231.1 90427 g71531 i0 76.9 0.933014354066986 65 15 93.3 0 2 196 178 242 WP_292561231.1 PBSX family phage terminase large subunit [Methanoculleus sp.] diamond 195 114 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
31891362 31891362 PRJNA994052_P_NODE_29997_length_282_cov_5.899522_g28755_i0 PRJNA994052 29997 282 5.899522 16.63665204 Candidatus Poseidonia alphae 1915863 Archaea Archaea 72.8 6.03e-13   NR MDA7464330.1 1915863 g28755 i0 42.4 0.904255319148936 85 42 83 1 234 1 61 145 MDA7464330.1 alpha-1,2-fucosyltransferase [Candidatus Poseidonia alphae] diamond 255 72.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae
32239689 32239689 PRJNA994052_P_NODE_78938_length_202_cov_9.038760_g77681_i0 PRJNA994052 78938 202 9.03876 18.2582952 Halomarina salina 1872699 Archaea Archaea 55.8 1.36e-7   NR WP_247415064.1 1872699 g77681 i0 62.2 0.668316831683168 45 13 60.9 2 127 5 1 45 WP_247415064.1 hypothetical protein [Halomarina salina] diamond 135 55.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina salina
32902107 32902107 PRJNA994052_P_NODE_64400_length_220_cov_4.884354_g63144_i0 PRJNA994052 64400 220 4.884354 10.7455788 Natronobeatus ordinarius 2963433 Archaea Archaea 42 0.0482   NR WP_255191692.1 2963433 g63144 i0 50 0.381818181818182 28 14 38.2 0 101 18 193 220 WP_255191692.1 esterase/lipase family protein [Natronobeatus ordinarius] diamond 84 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronobeatus Natronobeatus ordinarius

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;