RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA994052", tax_kingdom = "Metazoa" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA994052 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28863949 28863949 PRJNA994052_P_NODE_41048_length_256_cov_169.918033_g39801_i0 PRJNA994052 41048 256 169.918033 434.99016448 Metazoa 33208 Brachiopoda other_Eukaryota 43.1 0.0319   NR XP_013385134.1 7574 g39801 i0 47.5 1.40625 40 21 46.9 0 127 8 179 218 XP_013385134.1 rho GTPase-activating protein 20 isoform X2 [Lingula anatina] diamond 360 43.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30000934 30000934 PRJNA994052_P_NODE_41051_length_256_cov_166.010929_g39804_i0 PRJNA994052 41051 256 166.010929 424.98797824 Metazoa 33208 Brachiopoda other_Eukaryota 43.1 0.0319   NR XP_013385134.1 7574 g39804 i0 47.5 1.40625 40 21 46.9 0 127 8 179 218 XP_013385134.1 rho GTPase-activating protein 20 isoform X2 [Lingula anatina] diamond 360 43.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;