RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA994052", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA994052 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28700404 28700404 PRJNA994052_P_NODE_32547_length_275_cov_24.495050_g31303_i0 PRJNA994052 32547 275 24.49505 67.3613875 Armatimonadia bacterium 2663015 Bacteria Bacteria 85.5 4.58e-17   NR MEN6305448.1 2663015 g31303 i0 48.1 0.84 77 40 84 0 33 263 4 80 MEN6305448.1 hypothetical protein [Armatimonadia bacterium] diamond 231 85.5 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
29868576 29868576 PRJNA994052_P_NODE_34611_length_270_cov_32.659898_g33367_i0 PRJNA994052 34611 270 32.659898 88.1817246 Armatimonadia bacterium 2663015 Bacteria Bacteria 120 1.01e-31   NR MEN6404109.1 2663015 g33367 i0 65.5 0.933333333333333 84 29 93.3 0 257 6 53 136 MEN6404109.1 Mu-like prophage major head subunit gpT family protein [Armatimonadia bacterium] diamond 252 120 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
32807725 32807725 PRJNA994052_P_NODE_43640_length_252_cov_5.139665_g42392_i0 PRJNA994052 43640 252 5.139665 12.9519558 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 60.8 1.08e-8   NR MEA2552008.1 2682144 g42392 i0 47 0.785714285714286 66 35 78.6 0 219 22 78 143 MEA2552008.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 198 60.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;