RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA994052", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 15 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 15 ✖

bioproject 1

  • PRJNA994052 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976232 976232 PRJNA994052_P_NODE_23921_length_297_cov_118.482143_g22686_i0 PRJNA994052 23921 297 118.482143 351.89196471 Brachionus rubens 392764 Rotifera other_Eukaryota 246 1.18e-60   NTclustered gi|632795126|gb|KJ489417.1| 392764 g22686 i0 83.456 8.72390572390572 272 37 91 5 7 276 10913 11178 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 2591 246 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
976517 976517 PRJNA994052_P_NODE_47821_length_245_cov_0.906977_g46570_i0 PRJNA994052 47821 245 0.906977 2.22209365 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 102 1.24e-25   NR CAF0711365.1 104777 g46570 i0 88.5 0.636734693877551 52 6 63.7 0 167 12 1 52 CAF0711365.1 unnamed protein product [Brachionus calyciflorus] diamond 156 102 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
4804202 4804202 PRJNA994052_P_NODE_30104_length_281_cov_127.076923_g28862_i0 PRJNA994052 30104 281 127.076923 357.08615363 Brachionus rubens 392764 Rotifera other_Eukaryota 241 5.15e-59   NTclustered gi|632795126|gb|KJ489417.1| 392764 g28862 i0 83.088 8.74021352313167 272 38 96 5 7 276 10913 11178 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 2456 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
13729784 13729784 PRJNA994052_P_NODE_26291_length_291_cov_121.399083_g25051_i0 PRJNA994052 26291 291 121.399083 353.27133153 Brachionus rubens 392764 Rotifera other_Eukaryota 241 5.36e-59   NTclustered gi|632795126|gb|KJ489417.1| 392764 g25051 i0 83.088 8.90721649484536 272 38 93 5 7 276 10913 11178 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 2592 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
27221782 27221782 PRJNA994052_P_NODE_23122_length_300_cov_44.017621_g21893_i0 PRJNA994052 23122 300 44.017621 132.052863 Eurotatoria 2816136 Rotifera other_Eukaryota 125 7.229999999999998e-32   NR UJR09579.1 104782 g21893 i0 98.4 7.32 61 1 61 0 296 114 319 379 UJR09579.1 hypothetical protein I4U23_013814 [Adineta vaga] diamond 2196 126 0.992063492063492 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
28352936 28352936 PRJNA994052_P_NODE_76006_length_205_cov_31.893939_g74750_i0 PRJNA994052 76006 205 31.893939 65.38257495 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 46.6 8.92e-4   NR CAF0768887.1 104777 g74750 i0 72.4 0.424390243902439 29 8 42.4 0 1 87 227 255 CAF0768887.1 unnamed protein product [Brachionus calyciflorus] diamond 87 46.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
28416267 28416267 PRJNA994052_P_NODE_80386_length_200_cov_38.110236_g79129_i0 PRJNA994052 80386 200 38.110236 76.220472 Adineta steineri 433720 Rotifera other_Eukaryota 52 1.14e-5   NR CAF1353005.1 433720 g79129 i0 39.7 5.07 68 32 88.5 2 16 192 109 176 CAF1353005.1 unnamed protein product [Adineta steineri] diamond 1014 52 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28453750 28453750 PRJNA994052_P_NODE_54686_length_234_cov_4.900621_g53431_i0 PRJNA994052 54686 234 4.900621 11.46745314 Ploima 84394 Rotifera other_Eukaryota 45.8 6.97e-4   NR AHZ34262.1 392764 g53431 i0 42.4 3.62820512820513 59 30 70.5 1 3 167 45 103 AHZ34262.1 NADH dehydrogenase subunit 3 [Brachionus rubens] diamond 849 45.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
30152636 30152636 PRJNA994052_P_NODE_65592_length_218_cov_23.668966_g64336_i0 PRJNA994052 65592 218 23.668966 51.59834588 Rotaria sordida 392033 Rotifera other_Eukaryota 61.2 4.25e-10   NR CAF1251842.1 392033 g64336 i0 87.1 0.853211009174312 31 4 42.7 0 216 124 73 103 CAF1251842.1 unnamed protein product, partial [Rotaria sordida] diamond 186 61.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
30500459 30500459 PRJNA994052_P_NODE_59813_length_226_cov_48.143791_g58557_i0 PRJNA994052 59813 226 48.143791 108.80496766 Brachionus plicatilis 10195 Rotifera other_Eukaryota 61.6 2.37e-10   NR RMZ94500.1 10195 g58557 i0 51.4 2.76106194690265 70 13 92.9 1 224 15 14 62 RMZ94500.1 barrier-to-autointegration factor [Brachionus plicatilis] diamond 624 61.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30784777 30784777 PRJNA994052_P_NODE_74114_length_207_cov_80.880597_g72858_i0 PRJNA994052 74114 207 80.880597 167.42283579 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 59.7 2.37e-8   NR CAF0715915.1 104777 g72858 i0 77.1 1.01449275362319 35 8 50.7 0 15 119 485 519 CAF0715915.1 unnamed protein product [Brachionus calyciflorus] diamond 210 59.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
31200978 31200978 PRJNA994052_P_NODE_30675_length_280_cov_16.270531_g29432_i0 PRJNA994052 30675 280 16.270531 45.5574868 Adineta 104781 Rotifera other_Eukaryota 106 1.13e-26   NR CAF0776410.1 249248 g29432 i0 69.7 3.40714285714286 66 20 70.7 0 278 81 107 172 CAF0776410.1 unnamed protein product [Adineta ricciae] diamond 954 106 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31512019 31512019 PRJNA994052_P_NODE_80096_length_200_cov_107.724409_g78839_i0 PRJNA994052 80096 200 107.724409 215.448818 Adineta steineri 433720 Rotifera other_Eukaryota 89.4 2.6e-19   NR CAF0825838.1 433720 g78839 i0 73 4.725 63 17 94.5 0 194 6 260 322 CAF0825838.1 unnamed protein product [Adineta steineri] diamond 945 89.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
32081157 32081157 PRJNA994052_P_NODE_15258_length_313_cov_5.445833_g14037_i0 PRJNA994052 15258 313 5.445833 17.04545729 Adineta steineri 433720 Rotifera other_Eukaryota 78.6 2.15e-14   NR CAF0961661.1 433720 g14037 i0 85.4 1.17891373801917 41 6 39.3 0 12 134 164 204 CAF0961661.1 unnamed protein product [Adineta steineri] diamond 369 78.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
32118865 32118865 PRJNA994052_P_NODE_22518_length_302_cov_47.144105_g21289_i0 PRJNA994052 22518 302 47.144105 142.3751971 Rotaria 231623 Rotifera other_Eukaryota 75.5 2.37e-13   NR CAF3312438.1 392032 g21289 i0 73.9 0.913907284768212 46 12 45.7 0 301 164 662 707 CAF3312438.1 unnamed protein product [Rotaria socialis] diamond 276 75.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;