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contig_metadata

15 rows where bioproject = "PRJNA994052", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 15 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 15 ✖

bioproject 1

  • PRJNA994052 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976518 976518 PRJNA994052_P_NODE_47941_length_244_cov_92.432749_g46689_i0 PRJNA994052 47941 244 92.432749 225.53590756 uncultured Chytridiomycota 175247 Fungi Fungi 228 3.409999999999999e-55   NTclustered gi|311409149|gb|HQ219386.1| 175247 g46689 i0 84.348 84.0532786885246 230 24 94 5 13 242 1050 833 Uncultured Chytridiomycota clone AY2009A6 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20509 228 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota
5101384 5101384 PRJNA994052_P_NODE_46164_length_247_cov_90.396552_g44913_i0 PRJNA994052 46164 247 90.396552 223.27948344 Chytridiomycetes 451435 Fungi Fungi 185 2.11e-42   NTclustered gi|268636506|gb|FJ827648.1| 64516 g44913 i0 99.029 82.5668016194332 103 1 83 0 143 245 912 810 Phlyctochytrium californicum voucher CBS 667.73 18S ribosomal RNA gene, partial sequence blastn 20394 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium californicum
6079278 6079278 PRJNA994052_P_NODE_10305_length_336_cov_156.517110_g9099_i0 PRJNA994052 10305 336 156.51711 525.8974896 Asterophlyctis sp. 2750428 Fungi Fungi 54.7 0.009   NTclustered gi|1866582725|gb|MT730900.1| 2750428 g9099 i0 100 0.172619047619048 29 0 9 0 239 267 4348 4320 Asterophlyctis sp. isolate JEL0934 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 58 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Asterophlyctis Asterophlyctis sp.
8629589 8629589 PRJNA994052_P_NODE_52787_length_236_cov_251.073620_g51532_i0 PRJNA994052 52787 236 251.07362 592.5337432 Asterophlyctis sp. 2750428 Fungi Fungi 54.7 0.006   NTclustered gi|1866582725|gb|MT730900.1| 2750428 g51532 i0 100 0.245762711864407 29 0 12 0 70 98 4320 4348 Asterophlyctis sp. isolate JEL0934 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 58 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Asterophlyctis Asterophlyctis sp.
8926089 8926089 PRJNA994052_P_NODE_65847_length_218_cov_6.206897_g64591_i0 PRJNA994052 65847 218 6.206897 13.53103546 Chytridiomycetes 451435 Fungi Fungi 141 4e-29   NTclustered gi|311235598|ref|NG_027613.1| 110093 g64591 i0 92.929 110.270642201835 99 3 78 4 122 218 1640 1544 Polychytrium aggregatum JEL 109 28S rRNA gene, partial sequence; from reference material blastn 24039 141 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9904244 9904244 PRJNA994052_P_NODE_10668_length_333_cov_161.446154_g9460_i0 PRJNA994052 10668 333 161.446154 537.61569282 Asterophlyctis sp. 2750428 Fungi Fungi 54.7 0.009   NTclustered gi|1866582725|gb|MT730900.1| 2750428 g9460 i0 100 0.174174174174174 29 0 9 0 70 98 4320 4348 Asterophlyctis sp. isolate JEL0934 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 58 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Asterophlyctis Asterophlyctis sp.
25499657 25499657 PRJNA994052_P_NODE_57620_length_229_cov_100.679487_g56364_i0 PRJNA994052 57620 229 100.679487 230.55602523 Chytridiomycetes 451435 Fungi Fungi 185 1.9299999999999994e-42   NTclustered gi|268636506|gb|FJ827648.1| 64516 g56364 i0 99.029 86.4454148471616 103 1 86 0 3 105 810 912 Phlyctochytrium californicum voucher CBS 667.73 18S ribosomal RNA gene, partial sequence blastn 19796 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium californicum
26709589 26709589 PRJNA994052_P_NODE_40221_length_258_cov_38.589189_g38975_i0 PRJNA994052 40221 258 38.589189 99.56010762 Podochytrium sp. JEL 2750441 Fungi Fungi 48.1 5.19e-4   NR KAJ3058057.1 2724200 g38975 i0 40.9 0.767441860465116 66 37 76.7 1 10 207 29 92 KAJ3058057.1 GTPase-activating protein S13, partial [Podochytrium sp. JEL0797] diamond 198 48.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Podochytrium Podochytrium sp. JEL0797
27215923 27215923 PRJNA994052_P_NODE_69362_length_213_cov_32.164286_g68106_i0 PRJNA994052 69362 213 32.164286 68.50992918 Spizellomyces punctatus DAOM BR117 645134 Fungi Fungi 65.9 1.02e-10   NR XP_016612443.1 645134 g68106 i0 66.7 0.549295774647887 39 13 54.9 0 1 117 225 263 XP_016612443.1 40S ribosomal protein S2, variant [Spizellomyces punctatus DAOM BR117] diamond 117 65.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
28542639 28542639 PRJNA994052_P_NODE_43547_length_252_cov_13.871508_g42299_i0 PRJNA994052 43547 252 13.871508 34.95620016 Polyrhizophydium stewartii 2732419 Fungi Fungi 88.6 1.73e-18   NR KAL2915523.1 2732419 g42299 i0 57.8 0.988095238095238 83 35 98.8 0 250 2 115 197 KAL2915523.1 E1 ubiquitin-activating protein aos1 [Polyrhizophydium stewartii] diamond 249 88.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Polyrhizophydium Polyrhizophydium stewartii
28579966 28579966 PRJNA994052_P_NODE_17327_length_312_cov_5.953975_g16106_i0 PRJNA994052 17327 312 5.953975 18.576402 Eukaryota 2759 Fungi Fungi 89.7 2.72e-20   NR RKO95784.1 1555241 g16106 i0 49.4 5.91346153846154 87 38 77.9 1 305 63 58 144 RKO95784.1 ribosomal protein S15e [Caulochytrium protostelioides] diamond 1845 89.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Caulochytriales Caulochytriaceae Caulochytrium Caulochytrium protostelioides
29116789 29116789 PRJNA994052_P_NODE_59768_length_226_cov_59.326797_g58512_i0 PRJNA994052 59768 226 59.326797 134.07856122 Chytridiomycetes 451435 Fungi Fungi 58.2 2.23e-8   NR XP_031024043.1 1806994 g58512 i0 56 2.65486725663717 50 21 65 1 3 149 108 157 XP_031024043.1 uncharacterized protein SmJEL517_g04086 [Synchytrium microbalum] diamond 600 58.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
29142591 29142591 PRJNA994052_P_NODE_53229_length_236_cov_15.245399_g51974_i0 PRJNA994052 53229 236 15.245399 35.97914164 Phlyctochytrium bullatum 1352834 Fungi Fungi 65.1 7.53e-11   NR KAJ3117078.1 1352834 g51974 i0 60.4 0.610169491525424 48 19 61 0 225 82 119 166 KAJ3117078.1 hypothetical protein HDU96_007996 [Phlyctochytrium bullatum] diamond 144 65.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium bullatum
31543531 31543531 PRJNA994052_P_NODE_72816_length_209_cov_14.147059_g71560_i0 PRJNA994052 72816 209 14.147059 29.56735331 Quaeritorhiza haematococci 2654861 Fungi Fungi 109 1.88e-26   NR KAJ3091564.1 2654861 g71560 i0 76.5 0.976076555023923 68 16 97.6 0 208 5 231 298 KAJ3091564.1 thioredoxin-disulfide reductase [Quaeritorhiza haematococci] diamond 204 109 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
32681558 32681558 PRJNA994052_P_NODE_49680_length_242_cov_2.248521_g48426_i0 PRJNA994052 49680 242 2.248521 5.44142082 Fimicolochytrium jonesii 1396493 Fungi Fungi 43.5 0.019   NR XP_052926439.1 1396493 g48426 i0 38.2 2.29338842975207 55 34 68.2 0 34 198 303 357 XP_052926439.1 uncharacterized protein EV422DRAFT_525436 [Fimicolochytrium jonesii] diamond 555 43.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;