contig_metadata
15 rows where bioproject = "PRJNA994052" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2548947 | 2548947 | PRJNA994052_P_NODE_75682_length_205_cov_143.871212_g74426_i0 | PRJNA994052 | 75682 | 205 | 143.871212 | 294.9359846 | Planktothrix | 54304 | Bacteria | Bacteria | 359 | 9.42e-95 | NTclustered | gi|2261196917|emb|LR882969.1| | 1160 | g74426 | i0 | 99 | 163.960975609756 | 200 | 2 | 99 | 0 | 3 | 202 | 623222 | 623421 | Planktothrix agardhii strain PCC 7811 genome assembly, chromosome: I | blastn | 33612 | 359 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Planktothrix | Planktothrix agardhii | |
| 3825004 | 3825004 | PRJNA994052_P_NODE_18283_length_311_cov_45.726891_g17061_i0 | PRJNA994052 | 18283 | 311 | 45.726891 | 142.21063101 | root | 1 | Root_unresolved | Root_unresolved | 278 | 4.4e-70 | NTclustered | gi|63022551|gb|DQ004310.1| | 1211 | g17061 | i0 | 100 | 169.565916398714 | 150 | 0 | 58 | 0 | 1 | 150 | 210 | 61 | Uncultured cyanobacterium clone PEN12 16S ribosomal RNA gene, partial sequence | blastn | 52735 | 278 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 10201931 | 10201931 | PRJNA994052_P_NODE_79168_length_201_cov_138.335938_g77911_i0 | PRJNA994052 | 79168 | 201 | 138.335938 | 278.05523538 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 305 | 1.22e-78 | NTclustered | gi|225696212|gb|FJ805879.1| | 259957 | g77911 | i0 | 94.444 | 179.059701492537 | 198 | 11 | 99 | 0 | 4 | 201 | 1827 | 1630 | Uncultured Chroococcidiopsis sp. clone A3_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 35991 | 305 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 15301104 | 15301104 | PRJNA994052_P_NODE_68172_length_215_cov_5.429577_g66916_i0 | PRJNA994052 | 68172 | 215 | 5.429577 | 11.67359055 | Planktothrix | 54304 | Bacteria | Bacteria | 398 | 2.1099999999999997e-106 | NTclustered | gi|2261196917|emb|LR882969.1| | 1160 | g66916 | i0 | 100 | 12.8697674418605 | 215 | 0 | 100 | 0 | 1 | 215 | 643611 | 643397 | Planktothrix agardhii strain PCC 7811 genome assembly, chromosome: I | blastn | 2767 | 398 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Planktothrix | Planktothrix agardhii | |
| 22653942 | 22653942 | PRJNA994052_P_NODE_79178_length_201_cov_131.078125_g77921_i0 | PRJNA994052 | 79178 | 201 | 131.078125 | 263.46703125 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 300 | 5.65e-77 | NTclustered | gi|225696212|gb|FJ805879.1| | 259957 | g77921 | i0 | 93.939 | 165.094527363184 | 198 | 12 | 99 | 0 | 4 | 201 | 1827 | 1630 | Uncultured Chroococcidiopsis sp. clone A3_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 33184 | 300 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 26678009 | 26678009 | PRJNA994052_P_NODE_64281_length_220_cov_12.374150_g63025_i0 | PRJNA994052 | 64281 | 220 | 12.37415 | 27.22313 | Sphaerospermopsis sp. | 3100406 | Bacteria | Bacteria | 90.9 | 3.06e-19 | NR | MEB3151466.1 | 3100406 | g63025 | i0 | 58 | 0.940909090909091 | 69 | 29 | 94.1 | 0 | 214 | 8 | 10 | 78 | MEB3151466.1 hypothetical protein [Sphaerospermopsis sp.] | diamond | 207 | 90.9 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Aphanizomenonaceae | Sphaerospermopsis | Sphaerospermopsis sp. | |
| 28194913 | 28194913 | PRJNA994052_P_NODE_29126_length_284_cov_21.981043_g27884_i0 | PRJNA994052 | 29126 | 284 | 21.981043 | 62.42616212 | Candidatus Obscuribacter sp. | 2711154 | Bacteria | Bacteria | 104 | 1.2299999999999997e-23 | NR | MBK7841898.1 | 2711154 | g27884 | i0 | 94 | 0.528169014084507 | 50 | 3 | 52.8 | 0 | 134 | 283 | 279 | 328 | MBK7841898.1 hypothetical protein [Candidatus Obscuribacter sp.] | diamond | 150 | 104 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Melainabacteria | Candidatus Obscuribacterales | Candidatus Obscuribacteraceae | Candidatus Obscuribacter | Candidatus Obscuribacter sp. | ||
| 28352932 | 28352932 | PRJNA994052_P_NODE_58506_length_228_cov_30.503226_g57250_i0 | PRJNA994052 | 58506 | 228 | 30.503226 | 69.54735528 | Candidatus Saganbacteria bacterium | 2575572 | Bacteria | Bacteria | 59.7 | 3.12e-8 | NR | MBI5399194.1 | 2575572 | g57250 | i0 | 61.7 | 1.21052631578947 | 47 | 18 | 61.8 | 0 | 220 | 80 | 149 | 195 | MBI5399194.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Candidatus Saganbacteria bacterium] | diamond | 276 | 59.7 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Saganbacteria bacterium | ||||||
| 28889677 | 28889677 | PRJNA994052_P_NODE_65848_length_218_cov_6.165517_g64592_i0 | PRJNA994052 | 65848 | 218 | 6.165517 | 13.44082706 | Hassallia byssoidea | 482630 | Bacteria | Bacteria | 59.3 | 3.83e-8 | NR | WP_163519298.1 | 482630 | g64592 | i0 | 47.8 | 0.922018348623853 | 67 | 27 | 92.2 | 1 | 7 | 207 | 145 | 203 | WP_163519298.1 glycosyl hydrolase family 28-related protein [Hassallia byssoidea] | diamond | 201 | 59.3 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Tolypothrichaceae | Hassallia | Hassallia byssoidea | |
| 29331762 | 29331762 | PRJNA994052_P_NODE_61929_length_223_cov_25.120000_g60673_i0 | PRJNA994052 | 61929 | 223 | 25.12 | 56.0176 | Microcystis sp. M | 1127 | Bacteria | Bacteria | 143 | 6.88e-39 | NR | WP_287873658.1 | 2771111 | g60673 | i0 | 89 | 0.982062780269058 | 73 | 8 | 98.2 | 0 | 219 | 1 | 185 | 257 | WP_287873658.1 PBSX family phage terminase large subunit [Microcystis sp. M034S1] | diamond | 219 | 143 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Microcystaceae | Microcystis | Microcystis sp. M034S1 | |
| 30215895 | 30215895 | PRJNA994052_P_NODE_13252_length_316_cov_18.654321_g12032_i0 | PRJNA994052 | 13252 | 316 | 18.654321 | 58.94765436 | Acaryochloridaceae cyanobacterium RU_4_10 | 2720443 | Bacteria | Bacteria | 104 | 6.569999999999999e-24 | NR | NJM77419.1 | 2720443 | g12032 | i0 | 89.1 | 0.522151898734177 | 55 | 6 | 52.2 | 0 | 146 | 310 | 245 | 299 | NJM77419.1 diguanylate cyclase [Acaryochloridaceae cyanobacterium RU_4_10] | diamond | 165 | 104 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Acaryochloridales | Acaryochloridaceae | Acaryochloridaceae cyanobacterium RU_4_10 | ||
| 30317245 | 30317245 | PRJNA994052_P_NODE_22972_length_301_cov_4.381579_g21743_i0 | PRJNA994052 | 22972 | 301 | 4.381579 | 13.18855279 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 63.2 | 5.67e-10 | NR | WP_036903339.1 | 1218 | g21743 | i0 | 39.6 | 2.85049833887043 | 96 | 49 | 95.7 | 2 | 290 | 3 | 10 | 96 | WP_036903339.1 MULTISPECIES: LexA family protein [Prochlorococcus] | diamond | 858 | 63.5 | 0.995275590551181 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Prochlorococcaceae | Prochlorococcus | ||
| 30658409 | 30658409 | PRJNA994052_P_NODE_64033_length_220_cov_34.238095_g62777_i0 | PRJNA994052 | 64033 | 220 | 34.238095 | 75.323809 | Candidatus Sericytochromatia bacterium | 2762020 | Bacteria | Bacteria | 107 | 1.12e-25 | NR | MFN8579325.1 | 2762020 | g62777 | i0 | 62.5 | 0.981818181818182 | 72 | 27 | 98.2 | 0 | 3 | 218 | 234 | 305 | MFN8579325.1 site-specific DNA-methyltransferase [Candidatus Sericytochromatia bacterium] | diamond | 216 | 107 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Sericytochromatia | Candidatus Sericytochromatia bacterium | |||||
| 31448640 | 31448640 | PRJNA994052_P_NODE_66936_length_216_cov_55.300699_g65680_i0 | PRJNA994052 | 66936 | 216 | 55.300699 | 119.44950984 | Candidatus Margulisiibacteriota bacterium | 2053573 | Bacteria | Bacteria | 107 | 2.41e-28 | NR | HVO23915.1 | 2053573 | g65680 | i0 | 76.1 | 0.930555555555556 | 67 | 16 | 93.1 | 0 | 203 | 3 | 1 | 67 | HVO23915.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] | diamond | 201 | 107 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Margulisiibacteriota | Candidatus Margulisiibacteriota bacterium | |||||
| 31827938 | 31827938 | PRJNA994052_P_NODE_23457_length_299_cov_25.876106_g22225_i0 | PRJNA994052 | 23457 | 299 | 25.876106 | 77.36955694 | Candidatus Obscuribacterales bacterium | 2364082 | Bacteria | Bacteria | 123 | 4.1699999999999995e-30 | NR | MBX3154023.1 | 2364082 | g22225 | i0 | 78.4 | 0.973244147157191 | 97 | 17 | 93.3 | 1 | 20 | 298 | 1082 | 1178 | MBX3154023.1 hypothetical protein [Candidatus Obscuribacterales bacterium] | diamond | 291 | 123 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Melainabacteria | Candidatus Obscuribacterales | Candidatus Obscuribacterales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;