RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA994052" and tax_clade = "Cruciviruses"

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tax_superkingdom 1

tax_clade 1

  • Cruciviruses · 2 ✖

bioproject 1

  • PRJNA994052 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30311363 30311363 PRJNA994052_P_NODE_51372_length_239_cov_14.849398_g50117_i0 PRJNA994052 51372 239 14.849398 35.49006122 Crucivirus-like circular genetic element-85 2761503 Viruses Viruses 73.2 3.52e-14   NR QMW69071.1 2761503 g50117 i0 50.6 0.96652719665272 77 35 92.9 1 234 13 70 146 QMW69071.1 hypothetical protein [Crucivirus-like circular genetic element-85] diamond 231 73.2 1 Viruses Cruciviruses             Crucivirus-like circular genetic element-85
30911306 30911306 PRJNA994052_P_NODE_70894_length_211_cov_41.731884_g69638_i0 PRJNA994052 70894 211 41.731884 88.05427524 Crucivirus-93 2761340 Viruses Viruses 43.9 0.00964   NR QMW68648.1 2761340 g69638 i0 50 0.710900473933649 50 23 71.1 2 14 163 361 408 QMW68648.1 capsid protein [Crucivirus-93] diamond 150 43.9 1 Viruses Cruciviruses             Crucivirus-93

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;