RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA994052", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA994052 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28100256 28100256 PRJNA994052_P_NODE_48845_length_243_cov_18.382353_g47593_i0 PRJNA994052 48845 243 18.382353 44.66911779 Minisyncoccota bacterium 2053589 Bacteria Bacteria 91.3 3.03e-20   NR MCF7865481.1 2053589 g47593 i0 60 0.925925925925926 75 30 92.6 0 243 19 21 95 MCF7865481.1 helix-turn-helix domain-containing protein [Candidatus Paceibacterota bacterium] diamond 225 91.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29805323 29805323 PRJNA994052_P_NODE_36871_length_265_cov_26.098958_g35625_i0 PRJNA994052 36871 265 26.098958 69.1622387 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.4 0.00525   NR HEY6020583.1 2053589 g35625 i0 41.9 1.46037735849057 62 32 67.9 3 40 219 312 371 HEY6020583.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 387 45.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30279651 30279651 PRJNA994052_P_NODE_57172_length_230_cov_28.031847_g55917_i0 PRJNA994052 57172 230 28.031847 64.4732481 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.1 0.00163   NR HEY4488816.1 2053589 g55917 i0 52.8 1.34347826086957 36 15 44.3 1 112 11 4 39 HEY4488816.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 309 43.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31005926 31005926 PRJNA994052_P_NODE_22074_length_304_cov_5.800866_g20846_i0 PRJNA994052 22074 304 5.800866 17.63463264 Minisyncoccota bacterium 2053589 Bacteria Bacteria 169 2.44e-48   NR MBP7741248.1 2053589 g20846 i0 70.1 1.35197368421053 137 4 98.7 1 2 301 125 261 MBP7741248.1 UDP-N-acetylmuramate--L-alanine ligase [Candidatus Paceibacterota bacterium] diamond 411 169 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;