RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA994052", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA994052 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
976655 976655 PRJNA994052_P_NODE_60021_length_226_cov_17.379085_g58765_i0 PRJNA994052 60021 226 17.379085 39.2767321 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 86.3 7.23e-18   NR HKU17878.1 2973664 g58765 i0 62.1 0.876106194690266 66 25 87.6 0 221 24 112 177 HKU17878.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 198 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28510853 28510853 PRJNA994052_P_NODE_34607_length_270_cov_34.218274_g33363_i0 PRJNA994052 34607 270 34.218274 92.3893398 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 98.6 1.25e-21   NR MEO5949111.1 1917697 g33363 i0 57.3 1.95555555555556 89 37 97.8 1 7 270 534 622 MEO5949111.1 Ig-like domain-containing protein [Candidatus Saccharimonas sp.] diamond 528 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
29836878 29836878 PRJNA994052_P_NODE_52691_length_237_cov_6.524390_g51436_i0 PRJNA994052 52691 237 6.52439 15.4628043 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 145 8.32e-39   NR MBA3678775.1 2026720 g51436 i0 91 0.987341772151899 78 7 98.7 0 235 2 302 379 MBA3678775.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 234 145 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;