RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA994052", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Levyibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Levyibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA994052 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28447877 28447877 PRJNA994052_P_NODE_48966_length_243_cov_7.341176_g47714_i0 PRJNA994052 48966 243 7.341176 17.83905768 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 45.8 0.00307   NR MBP9716717.1 2052151 g47714 i0 34.2 0.901234567901235 73 48 90.1 0 241 23 586 658 MBP9716717.1 hypothetical protein [Candidatus Levyibacteriota bacterium] diamond 219 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
30569212 30569212 PRJNA994052_P_NODE_28353_length_286_cov_23.009390_g27111_i0 PRJNA994052 28353 286 23.00939 65.8068554 Bacteria 2 Bacteria Bacteria 57.8 2.62e-7   NR MBI2442922.1 2052151 g27111 i0 39.5 2.18181818181818 81 47 85 1 284 42 116 194 MBI2442922.1 UDP-N-acetylmuramate dehydrogenase [Candidatus Levyibacteriota bacterium] diamond 624 57.8 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;