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contig_metadata

17 rows where bioproject = "PRJNA994052" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 17 ✖

bioproject 1

  • PRJNA994052 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6079538 6079538 PRJNA994052_P_NODE_33305_length_273_cov_33.480000_g32061_i0 PRJNA994052 33305 273 33.48 91.4004 Perichaena dictyonema 2951132 Evosea other_Eukaryota 497 2.68e-136   NTclustered gi|2250222210|gb|ON713340.1| 2951132 g32061 i0 99.632 96.3626373626374 272 1 99 0 1 272 1176 905 Perichaena dictyonema voucher MA59057 small subunit ribosomal RNA gene, partial sequence blastn 26307 497 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Perichaena Perichaena dictyonema
10201704 10201704 PRJNA994052_P_NODE_27788_length_287_cov_148.299065_g26547_i0 PRJNA994052 27788 287 148.299065 425.61831655 Stemonitidae 137615 Evosea other_Eukaryota 486 6.139999999999999e-133   NTclustered gi|5712220|gb|AF093247.1|AF093247 101284 g26547 i0 98.897 94.5296167247387 272 3 95 0 10 281 1006 1277 Hyperamoeba sp. ATCC50750 small subunit ribosomal RNA gene, complete sequence blastn 27130 490 0.991836734693878 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. ATCC50750
12752270 12752270 PRJNA994052_P_NODE_19270_length_310_cov_30.738397_g18047_i0 PRJNA994052 19270 310 30.738397 95.2890307 Polyschismium 2986373 Root_unresolved Root_unresolved 243 1.6000000000000004e-59   NTclustered gi|2651357789|gb|PP174304.1| 1892891 g18047 i0 98.54 43.9516129032258 137 2 44 0 162 298 3294 3430 Amoebozoa sp. isolate 114_WLI small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13625 243 1 Eukaryota Amoebozoa             Amoebozoa sp.
19124363 19124363 PRJNA994052_P_NODE_27035_length_289_cov_146.342593_g25795_i0 PRJNA994052 27035 289 146.342593 422.93009377 Stemonitidae 137615 Evosea other_Eukaryota 497 2.8599999999999998e-136   NTclustered gi|5712220|gb|AF093247.1|AF093247 101284 g25795 i0 99.632 93.9411764705882 272 1 94 0 9 280 1277 1006 Hyperamoeba sp. ATCC50750 small subunit ribosomal RNA gene, complete sequence blastn 27149 501 0.992015968063872 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. ATCC50750
20103371 20103371 PRJNA994052_P_NODE_80436_length_200_cov_32.330709_g79179_i0 PRJNA994052 80436 200 32.330709 64.661418 Thecochaos fibrillosum 2789656 Discosea other_Eukaryota 65.8 2.23e-6   NTclustered gi|1932887129|gb|MW261337.1| 2789656 g79179 i0 100 16.245 35 0 18 0 21 55 616 582 Thecochaos fibrillosum isolate Tch small subunit ribosomal RNA gene, partial sequence blastn 3249 65.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecochaos Thecochaos fibrillosum
21378846 21378846 PRJNA994052_P_NODE_61817_length_223_cov_37.206667_g60561_i0 PRJNA994052 61817 223 37.206667 82.97086741 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 211 3.09e-50   NTclustered gi|511487963|gb|JX898537.1| 1260765 g60561 i0 90.184 6.62780269058296 163 14 73 2 62 223 401 240 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 1478 211 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
23929262 23929262 PRJNA994052_P_NODE_68539_length_214_cov_38.645390_g67283_i0 PRJNA994052 68539 214 38.64539 82.7011346 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 104 5.13e-18   NTclustered gi|221185864|gb|FJ577811.1| 590481 g67283 i0 98.305 24.1775700934579 59 1 28 0 155 213 574 516 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 5174 104 1 Eukaryota Amoebozoa             uncultured Amoebozoa
25203009 25203009 PRJNA994052_P_NODE_81240_length_199_cov_45.031746_g79983_i0 PRJNA994052 81240 199 45.031746 89.61317454 Thecamoeba similis 242545 Discosea other_Eukaryota 187 4.54e-43   NTclustered gi|33946350|gb|AY294154.1| 242545 g79983 i0 91.304 67.427135678392 138 11 69 1 55 191 1162 1025 Thecamoeba similis actin mRNA, complete cds blastn 13418 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
26741189 26741189 PRJNA994052_P_NODE_55421_length_233_cov_2.787500_g54166_i0 PRJNA994052 55421 233 2.7875 6.494875 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84 9.16e-17   NR PRP87109.1 1890364 g54166 i0 53.1 3.12875536480687 64 30 82.4 0 192 1 4 67 PRP87109.1 peptidase M20 [Planoprotostelium fungivorum] diamond 729 84 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26931576 26931576 PRJNA994052_P_NODE_21402_length_306_cov_4.738197_g20175_i0 PRJNA994052 21402 306 4.738197 14.49888282 Physarum polycephalum 5791 Evosea other_Eukaryota 66.6 6.8e-12   NR AEF68171.1 5791 g20175 i0 88.2 0.333333333333333 34 4 33.3 0 143 42 57 90 AEF68171.1 Sm-E-like protein [Physarum polycephalum] diamond 102 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
28258093 28258093 PRJNA994052_P_NODE_69526_length_213_cov_15.914286_g68270_i0 PRJNA994052 69526 213 15.914286 33.89742918 Dictyostelium purpureum 5786 Evosea other_Eukaryota 52 1.42e-6   NR XP_003293203.1 5786 g68270 i0 63.2 0.535211267605634 38 14 53.5 0 187 74 59 96 XP_003293203.1 uncharacterized protein DICPUDRAFT_93002 [Dictyostelium purpureum] diamond 114 52 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28384515 28384515 PRJNA994052_P_NODE_57386_length_230_cov_6.503185_g56131_i0 PRJNA994052 57386 230 6.503185 14.9573255 Dictyostelium purpureum 5786 Evosea other_Eukaryota 55.8 7.32e-7   NR XP_003290152.1 5786 g56131 i0 70.3 0.952173913043478 37 11 48.3 0 183 73 371 407 XP_003290152.1 uncharacterized protein DICPUDRAFT_154640 [Dictyostelium purpureum] diamond 219 55.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28731924 28731924 PRJNA994052_P_NODE_78087_length_203_cov_6.376923_g76830_i0 PRJNA994052 78087 203 6.376923 12.94515369 Cavenderia fasciculata 261658 Evosea other_Eukaryota 61.6 4.08e-9   NR XP_004351803.1 261658 g76830 i0 79.1 0.635467980295567 43 9 63.5 0 3 131 278 320 XP_004351803.1 succinate-CoA ligase [Cavenderia fasciculata] diamond 129 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29331754 29331754 PRJNA994052_P_NODE_22569_length_302_cov_21.240175_g21340_i0 PRJNA994052 22569 302 21.240175 64.1453285 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 55.5 2.55e-6   NR XP_012752247.1 1410327 g21340 i0 29.3 1.1523178807947 116 53 86.4 1 301 41 321 436 XP_012752247.1 hypothetical protein SAMD00019534_077530 [Acytostelium subglobosum LB1] diamond 348 55.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
31986161 31986161 PRJNA994052_P_NODE_24878_length_295_cov_17.968468_g23642_i0 PRJNA994052 24878 295 17.968468 53.0069806 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 95.9 5.22e-21   NR KYR00559.1 361077 g23642 i0 49.1 1.07796610169492 106 29 86.4 2 5 259 265 366 KYR00559.1 transmembrane protein [Tieghemostelium lacteum] diamond 318 95.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32144538 32144538 PRJNA994052_P_NODE_60398_length_225_cov_55.868421_g59142_i0 PRJNA994052 60398 225 55.868421 125.70394725 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 58.2 1.05e-7   NR PRP74799.1 1890364 g59142 i0 70.5 0.586666666666667 44 13 58.7 0 205 74 472 515 PRP74799.1 actin binding protein [Planoprotostelium fungivorum] diamond 132 58.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32397783 32397783 PRJNA994052_P_NODE_23159_length_300_cov_28.211454_g21930_i0 PRJNA994052 23159 300 28.211454 84.634362 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 55.1 3.37e-6   NR XP_012752247.1 1410327 g21930 i0 29.3 1.16 116 54 88 1 2 265 321 436 XP_012752247.1 hypothetical protein SAMD00019534_077530 [Acytostelium subglobosum LB1] diamond 348 55.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;