RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA993416" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA993416 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26614765 26614765 PRJNA993416_P_NODE_1521_length_687_cov_2.094463_g1423_i0 PRJNA993416 1521 687 2.094463 14.38896081 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 56.2 1.6e-5   NR NIQ16335.1 2080303 g1423 i0 37.1 0.270742358078603 62 39 27.1 0 187 2 3 64 NIQ16335.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 186 56.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
26994567 26994567 PRJNA993416_P_NODE_5342_length_362_cov_1.584775_g5237_i0 PRJNA993416 5342 362 1.584775 5.7368855 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 47.4 6.55e-4   NR NIQ15543.1 2080303 g5237 i0 41.2 0.422651933701657 51 30 42.3 0 243 91 4 54 NIQ15543.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 153 47.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
29995070 29995070 PRJNA993416_P_NODE_3711_length_439_cov_1.691257_g3606_i0 PRJNA993416 3711 439 1.691257 7.42461823 Smithella sp. 2053614 Bacteria Bacteria 160 1.0499999999999999e-42   NR MEN6623048.1 2053614 g3606 i0 56.6 0.977220956719818 143 60 97.7 1 434 6 358 498 MEN6623048.1 phage tail sheath subtilisin-like domain-containing protein [Smithella sp.] diamond 429 160 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Smithellaceae Smithella Smithella sp.
30342976 30342976 PRJNA993416_P_NODE_7752_length_296_cov_1.874439_g7647_i0 PRJNA993416 7752 296 1.874439 5.54833944 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 92.4 5.27e-20   NR NIQ14520.1 2080303 g7647 i0 50 1.01351351351351 100 45 98.3 2 6 296 41 138 NIQ14520.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 300 92.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
30563280 30563280 PRJNA993416_P_NODE_5593_length_353_cov_1.442857_g5488_i0 PRJNA993416 5593 353 1.442857 5.09328521 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 59.3 7.32e-8   NR NIQ13044.1 2080303 g5488 i0 33.1 1.07932011331445 127 70 97.7 5 348 4 46 169 NIQ13044.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 381 59.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
32271176 32271176 PRJNA993416_P_NODE_6938_length_315_cov_1.177686_g6833_i0 PRJNA993416 6938 315 1.177686 3.7097109 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 120 4.4199999999999995e-30   NR NIQ13763.1 2080303 g6833 i0 52.9 0.990476190476191 104 48 98.1 1 2 310 120 223 NIQ13763.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 312 120 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;