RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA993416" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA993416 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29678734 29678734 PRJNA993416_P_NODE_5610_length_352_cov_2.179211_g5505_i0 PRJNA993416 5610 352 2.179211 7.67082272 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 151 8.930000000000001e-44   NR HYF75015.1 2109671 g5505 i0 61.3 1.01420454545455 119 43 99.7 3 352 2 7 124 HYF75015.1 nucleoside 2-deoxyribosyltransferase domain-containing protein [Candidatus Nitrosocosmicus sp.] diamond 357 151 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
30311345 30311345 PRJNA993416_P_NODE_16552_length_231_cov_2.221519_g16447_i0 PRJNA993416 16552 231 2.221519 5.13170889 Nitrososphaera sp. 1971748 Archaea Archaea 46.2 0.00188   NR HEY1249177.1 1971748 g16447 i0 41.4 0.909090909090909 70 38 89.6 2 5 211 226 293 HEY1249177.1 hypothetical protein [Nitrososphaera sp.] diamond 210 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32182132 32182132 PRJNA993416_P_NODE_8638_length_286_cov_1.037559_g8533_i0 PRJNA993416 8638 286 1.037559 2.96741874 root 1 Root_unresolved Root_unresolved 101 1.34e-22   NR MCI0565003.1 1971748 g8533 i0 58.5 1.98251748251748 94 37 96.5 1 10 285 88 181 MCI0565003.1 hypothetical protein [Nitrososphaera sp.] diamond 567 101 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32334641 32334641 PRJNA993416_P_NODE_1059_length_799_cov_1.588154_g967_i0 PRJNA993416 1059 799 1.588154 12.68935046 Nitrososphaera sp. 1971748 Archaea Archaea 51.2 5.95e-4   NR MCI0563640.1 1971748 g967 i0 24.4 0.660826032540676 176 123 65.3 5 30 551 1 168 MCI0563640.1 hypothetical protein [Nitrososphaera sp.] diamond 528 51.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;