RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA993416" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA993416 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27152440 27152440 PRJNA993416_P_NODE_11482_length_260_cov_1.449198_g11377_i0 PRJNA993416 11482 260 1.449198 3.7679148 Chlamydiota bacterium 2081524 Bacteria Bacteria 82.4 1.34e-16   NR NDD59240.1 2081524 g11377 i0 37.8 0.946153846153846 82 51 94.6 0 9 254 178 259 NDD59240.1 hypothetical protein [Chlamydiota bacterium] diamond 246 82.4 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28100238 28100238 PRJNA993416_P_NODE_11245_length_262_cov_1.682540_g11140_i0 PRJNA993416 11245 262 1.68254 4.4082548 Chlamydiales bacterium 2047757 Bacteria Bacteria 59.7 2.95e-8   NR MFI5343963.1 2047757 g11140 i0 36.9 0.744274809160305 65 41 74.4 0 212 18 185 249 MFI5343963.1 hypothetical protein [Chlamydiales bacterium] diamond 195 59.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28258080 28258080 PRJNA993416_P_NODE_1226_length_752_cov_2.449190_g1131_i0 PRJNA993416 1226 752 2.44919 18.4179088 Chlamydiales bacterium 2047757 Bacteria Bacteria 85.5 1.21e-15   NR MFI5343968.1 2047757 g1131 i0 40.9 0.458776595744681 115 61 43.9 2 423 752 35 147 MFI5343968.1 hypothetical protein [Chlamydiales bacterium] diamond 345 85.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29205668 29205668 PRJNA993416_P_NODE_3429_length_458_cov_2.792208_g3324_i0 PRJNA993416 3429 458 2.792208 12.78831264 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 75.9 5.53e-13   NR HKZ00502.1 2047756 g3324 i0 42.4 0.556768558951965 85 46 55.7 1 270 16 1 82 HKZ00502.1 polysaccharide pyruvyl transferase family protein [Rhabdochlamydiaceae bacterium] diamond 255 75.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
31669914 31669914 PRJNA993416_P_NODE_5877_length_344_cov_0.929889_g5772_i0 PRJNA993416 5877 344 0.929889 3.19881816 Chlamydiales bacterium 2047757 Bacteria Bacteria 57 8.72e-7   NR MFI5343968.1 2047757 g5772 i0 31.7 0.715116279069767 82 56 71.5 0 5 250 189 270 MFI5343968.1 hypothetical protein [Chlamydiales bacterium] diamond 246 57 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;