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contig_metadata

8 rows where bioproject = "PRJNA986547" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA986547 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
974133 974133 PRJNA986547_P_NODE_13841_length_229_cov_4.596154_g13759_i0 PRJNA986547 13841 229 4.596154 10.52519266 Thermococcus thioreducens 277988 Archaea Archaea 56.5 0.002   NTclustered gi|1214555413|gb|CP015105.1| 277988 g13759 i0 100 0.620087336244541 30 0 13 0 129 158 119146 119117 Thermococcus thioreducens strain OGL-20P chromosome, complete genome blastn 142 56.5 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus thioreducens
3524772 3524772 PRJNA986547_P_NODE_5483_length_274_cov_2.208955_g5401_i0 PRJNA986547 5483 274 2.208955 6.0525367 Halomicrobium salinisoli 2878391 Archaea Archaea 172 1.85e-38   NTclustered gi|2110956525|gb|CP084463.1| 2878391 g5401 i0 79.216 62.4160583941606 255 48 92 5 1 252 2251376 2251124 Halomicrobium salinisoli strain LT50 chromosome, complete genome blastn 17102 172 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium salinisoli
6077396 6077396 PRJNA986547_P_NODE_17205_length_199_cov_4.055556_g17123_i0 PRJNA986547 17205 199 4.055556 8.07055644 root 1 Root_unresolved Root_unresolved 93.6 2.51e-20   NR MDP2436605.1 1906665 g17123 i0 58.5 1.95979899497487 65 27 98 0 3 197 367 431 MDP2436605.1 terpene cyclase/mutase family protein [archaeon] diamond 390 94.4 0.991525423728813 Archaea               archaeon
28668802 28668802 PRJNA986547_P_NODE_13647_length_231_cov_2.094937_g13565_i0 PRJNA986547 13647 231 2.094937 4.83930447 Methanosphaerula palustris 475088 Archaea Archaea 51.2 3.23e-5   NR WP_012618399.1 475088 g13565 i0 48.2 2.48051948051948 56 29 72.7 0 171 4 201 256 WP_012618399.1 sensor histidine kinase [Methanosphaerula palustris] diamond 573 51.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanosphaerula Methanosphaerula palustris
31517809 31517809 PRJNA986547_P_NODE_13196_length_234_cov_2.341615_g13114_i0 PRJNA986547 13196 234 2.341615 5.4793791 Archaea 2157 Archaea Archaea 94 1.8899999999999998e-20   NR MBN1328457.1 2026747 g13114 i0 61.9 1.79487179487179 63 24 80.8 0 216 28 202 264 MBN1328457.1 NAD(P)/FAD-dependent oxidoreductase [Candidatus Heimdallarchaeota archaeon] diamond 420 94 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
32397745 32397745 PRJNA986547_P_NODE_3899_length_292_cov_2.018265_g3817_i0 PRJNA986547 3899 292 2.018265 5.8933338 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 62.8 2.4e-10   NR MDP2974330.1 2026736 g3817 i0 52.6 2.59931506849315 57 27 58.6 0 118 288 17 73 MDP2974330.1 NTP transferase domain-containing protein [Candidatus Iainarchaeum archaeon] diamond 759 62.8 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
32807674 32807674 PRJNA986547_P_NODE_14220_length_227_cov_2.811688_g14138_i0 PRJNA986547 14220 227 2.811688 6.38253176 archaeon 1906665 Archaea Archaea 57 1.55e-7   NR MDP2438566.1 1906665 g14138 i0 46.3 0.713656387665198 54 29 71.4 0 35 196 31 84 MDP2438566.1 EF-hand domain-containing protein [archaeon] diamond 162 57 1 Archaea               archaeon
32807676 32807676 PRJNA986547_P_NODE_3420_length_304_cov_5.935065_g3338_i0 PRJNA986547 3420 304 5.935065 18.0425976 Candidatus Heimdallarchaeota archaeon 2026747 Archaea Archaea 69.3 5.4e-12   NR MCY3412421.1 2026747 g3338 i0 43.2 0.9375 95 51 91.8 2 301 23 18 111 MCY3412421.1 GTP-binding protein [Candidatus Heimdallarchaeota archaeon] diamond 285 69.3 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;