RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986547" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA986547 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11475945 11475945 PRJNA986547_P_NODE_12429_length_239_cov_3.265060_g12347_i0 PRJNA986547 12429 239 3.26506 7.8034934 Orthorubulavirus 2560195 Viruses Viruses 442 1.0899999999999994e-119   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g12347 i0 100 69.0376569037657 239 0 100 0 1 239 14343 14581 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 16500 442 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24223978 24223978 PRJNA986547_P_NODE_9819_length_247_cov_2.505747_g9737_i0 PRJNA986547 9819 247 2.505747 6.18919509 Orthorubulavirus 2560195 Viruses Viruses 451 1.88e-122   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g9737 i0 99.595 97 247 1 100 0 1 247 1225 1471 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 23959 451 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;