RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA986547" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 6 ✖

bioproject 1

  • PRJNA986547 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6376370 6376370 PRJNA986547_P_NODE_3725_length_295_cov_1.914414_g3643_i0 PRJNA986547 3725 295 1.914414 5.6475213 root 1 Root_unresolved Root_unresolved 545 1.03e-150   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g3643 i0 100 99.5593220338983 295 0 100 0 1 295 2064 2358 Moloney murine leukemia virus, complete genome blastn 29370 545 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
10200900 10200900 PRJNA986547_P_NODE_428_length_703_cov_2.507937_g348_i0 PRJNA986547 428 703 2.507937 17.63079711 Gammaretrovirus 153135 Viruses Viruses 1293 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g348 i0 99.858 99.9815078236131 703 1 100 0 1 703 3235 3937 Moloney murine leukemia virus, complete genome blastn 70287 1293 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
19123558 19123558 PRJNA986547_P_NODE_1175_length_411_cov_1.804734_g1093_i0 PRJNA986547 1175 411 1.804734 7.41745674 Gammaretrovirus 153135 Viruses Viruses 754 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g1093 i0 99.757 94.5474452554745 411 1 100 0 1 411 4604 4194 Moloney murine leukemia virus, complete genome blastn 38859 754 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
24223895 24223895 PRJNA986547_P_NODE_139_length_1398_cov_2.373585_g94_i0 PRJNA986547 139 1398 2.373585 33.1827183 Gammaretrovirus 153135 Viruses Viruses 2410 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g94 i0 99.472 87.6466380543634 1327 6 99 1 73 1398 8007 6681 Moloney murine leukemia virus, complete genome blastn 122530 2410 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
24223943 24223943 PRJNA986547_P_NODE_479_length_660_cov_1.797274_g399_i0 PRJNA986547 479 660 1.797274 11.8620084 Gammaretrovirus 153135 Viruses Viruses 1203 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g399 i0 99.545 57.4515151515152 660 3 100 0 1 660 5239 4580 Moloney murine leukemia virus, complete genome blastn 37918 1203 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
24223945 24223945 PRJNA986547_P_NODE_519_length_628_cov_1.398198_g439_i0 PRJNA986547 519 628 1.398198 8.78068344 root 1 Root_unresolved Root_unresolved 1122 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g439 i0 98.885 99.9585987261146 628 7 100 0 1 628 2948 2321 Moloney murine leukemia virus, complete genome blastn 62774 1122 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;