RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA986547", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA986547 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27658495 27658495 PRJNA986547_P_NODE_7004_length_261_cov_2.430851_g6922_i0 PRJNA986547 7004 261 2.430851 6.34452111 Opisthorchis viverrini 6198 Platyhelminthes Platyhelminthes 46.2 7.22e-4   NR OON15199.1 6198 g6922 i0 37.2 0.494252873563218 43 27 49.4 0 12 140 23 65 OON15199.1 putative Cys-rich domain protein [Opisthorchis viverrini] diamond 129 46.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
31043736 31043736 PRJNA986547_P_NODE_14755_length_221_cov_15.054054_g14673_i0 PRJNA986547 14755 221 15.054054 33.26945934 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.1 1.26e-6   NR GAA51789.1 79923 g14673 i0 51.8 3.01357466063348 56 25 73.3 1 10 171 98 153 GAA51789.1 cyclin-dependent kinase 6 [Clonorchis sinensis] diamond 666 55.5 0.992792792792793 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Clonorchis Clonorchis sinensis
31960500 31960500 PRJNA986547_P_NODE_4517_length_284_cov_4.890995_g4435_i0 PRJNA986547 4517 284 4.890995 13.8904258 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.3 1.38e-4   NR XP_009176078.1 6198 g4435 i0 62.9 5.45070422535211 35 13 37 0 2 106 123 157 XP_009176078.1 hypothetical protein T265_11216 [Opisthorchis viverrini] diamond 1548 49.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;