RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986547", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA986547 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28921109 28921109 PRJNA986547_P_NODE_8148_length_253_cov_2.400000_g8066_i0 PRJNA986547 8148 253 2.4 6.072 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 60.5 2.35e-8   NR KAJ8033349.1 206669 g8066 i0 39.7 0.806324110671937 68 40 80.6 1 248 45 357 423 KAJ8033349.1 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A [Holothuria leucospilota] diamond 204 60.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
31707427 31707427 PRJNA986547_P_NODE_6597_length_264_cov_3.115183_g6515_i0 PRJNA986547 6597 264 3.115183 8.22408312 Metazoa 33208 Echinodermata other_Eukaryota 97.8 9.77e-23   NR XP_033634008.1 7604 g6515 i0 63.2 2.96590909090909 87 32 98.9 0 263 3 136 222 XP_033634008.1 40S ribosomal protein S6-like [Asterias rubens] diamond 783 97.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;