contig_metadata
9 rows where bioproject = "PRJNA986547", tax_clade = "Sar" and tax_phylum = "Oomycota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22651201 | 22651201 | PRJNA986547_P_NODE_1438_length_382_cov_0.951456_g1356_i0 | PRJNA986547 | 1438 | 382 | 0.951456 | 3.63456192 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 195 | 1.7499999999999998e-61 | NR | KAF0743747.1 | 100861 | g1356 | i0 | 73.2 | 2.88219895287958 | 123 | 33 | 96.6 | 0 | 13 | 381 | 1 | 123 | KAF0743747.1 hypothetical protein Ae201684_001401 [Aphanomyces euteiches] | diamond | 1101 | 195 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 27569442 | 27569442 | PRJNA986547_P_NODE_12244_length_240_cov_5.071856_g12162_i0 | PRJNA986547 | 12244 | 240 | 5.071856 | 12.1724544 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 89.4 | 1.44e-18 | NR | XP_067817417.1 | 4779 | g12162 | i0 | 58.2 | 16.8125 | 67 | 28 | 83.8 | 0 | 240 | 40 | 539 | 605 | XP_067817417.1 hypothetical protein CCR75_004345 [Bremia lactucae] | diamond | 4035 | 89.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Bremia | Bremia lactucae | ||
| 27885193 | 27885193 | PRJNA986547_P_NODE_8725_length_250_cov_3.372881_g8643_i0 | PRJNA986547 | 8725 | 250 | 3.372881 | 8.4322025 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 85.1 | 4.49e-17 | NR | XP_067789266.1 | 4785 | g8643 | i0 | 55.1 | 12.324 | 78 | 33 | 93.6 | 1 | 234 | 1 | 45 | 120 | XP_067789266.1 Alanine aminotransferase 2 [Phytophthora cinnamomi] | diamond | 3081 | 85.9 | 0.990686845168801 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 28958966 | 28958966 | PRJNA986547_P_NODE_13248_length_233_cov_5.300000_g13166_i0 | PRJNA986547 | 13248 | 233 | 5.3 | 12.349 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 72 | 9.3e-13 | NR | RHY18808.1 | 112090 | g13166 | i0 | 69.6 | 2.88412017167382 | 56 | 17 | 72.1 | 0 | 168 | 1 | 193 | 248 | RHY18808.1 hypothetical protein DYB25_003459 [Aphanomyces astaci] | diamond | 672 | 72.4 | 0.994475138121547 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 28990628 | 28990628 | PRJNA986547_P_NODE_4908_length_280_cov_2.265700_g4826_i0 | PRJNA986547 | 4908 | 280 | 2.2657 | 6.34396 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 55.1 | 2.76e-6 | NR | KAE8913668.1 | 53985 | g4826 | i0 | 39.3 | 2.86071428571429 | 89 | 39 | 83.6 | 3 | 1 | 234 | 368 | 452 | KAE8913668.1 hypothetical protein PF003_g2265 [Phytophthora fragariae] | diamond | 801 | 55.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora fragariae | ||
| 30285518 | 30285518 | PRJNA986547_P_NODE_16032_length_209_cov_4.257353_g15950_i0 | PRJNA986547 | 16032 | 209 | 4.257353 | 8.89786777 | root | 1 | Root_unresolved | Root_unresolved | 80.5 | 1.19e-15 | NR | RLN45783.1 | 325452 | g15950 | i0 | 62.1 | 9.90430622009569 | 58 | 21 | 83.3 | 1 | 197 | 24 | 680 | 736 | RLN45783.1 hypothetical protein BBJ29_004098 [Phytophthora kernoviae] | diamond | 2070 | 81.3 | 0.990159901599016 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora kernoviae | ||
| 31353654 | 31353654 | PRJNA986547_P_NODE_8916_length_250_cov_0.870056_g8834_i0 | PRJNA986547 | 8916 | 250 | 0.870056 | 2.17514 | Phytophthora oleae | 2107226 | SAR_Eukaryotes | SAR_Eukaryotes | 51.6 | 3.08e-5 | NR | KAL3666721.1 | 2107226 | g8834 | i0 | 38.7 | 2.652 | 62 | 38 | 74.4 | 0 | 237 | 52 | 605 | 666 | KAL3666721.1 hypothetical protein V7S43_008344 [Phytophthora oleae] | diamond | 663 | 51.6 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora oleae | ||
| 31707425 | 31707425 | PRJNA986547_P_NODE_16497_length_204_cov_7.496183_g16415_i0 | PRJNA986547 | 16497 | 204 | 7.496183 | 15.29221332 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 93.2 | 3.76e-20 | NR | CCI45297.1 | 65357 | g16415 | i0 | 58.8 | 26.9558823529412 | 68 | 27 | 98.5 | 1 | 202 | 2 | 378 | 445 | CCI45297.1 unnamed protein product [Albugo candida] | diamond | 5499 | 94 | 0.991489361702128 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida | ||
| 31922935 | 31922935 | PRJNA986547_P_NODE_15937_length_209_cov_12.992647_g15855_i0 | PRJNA986547 | 15937 | 209 | 12.992647 | 27.15463223 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 43.1 | 0.0179 | NR | XP_008875065.1 | 157072 | g15855 | i0 | 45.2 | 0.889952153110048 | 62 | 31 | 86.1 | 2 | 3 | 182 | 441 | 501 | XP_008875065.1 hypothetical protein H310_10446 [Aphanomyces invadans] | diamond | 186 | 43.1 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;