RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986547", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA986547 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7351931 7351931 PRJNA986547_P_NODE_16566_length_204_cov_4.595420_g16484_i0 PRJNA986547 16566 204 4.59542 9.3746568 uncultured Chlamydiales bacterium 174324 Bacteria Bacteria 357 3.37e-94   NTclustered gi|1052489322|gb|KU664251.1| 174324 g16484 i0 98.515 214.161764705882 202 3 99 0 1 202 91 292 Uncultured Chlamydiales bacterium clone 2955 23S ribosomal RNA gene, partial sequence blastn 43689 357 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     uncultured Chlamydiales bacterium
27727711 27727711 PRJNA986547_P_NODE_2564_length_310_cov_8.004219_g2482_i0 PRJNA986547 2564 310 8.004219 24.8130789 Candidatus Rhabdochlamydia 292833 Bacteria Bacteria 89 5.92e-19   NR PWU14824.1 2081524 g2482 i0 80 0.967741935483871 50 10 48.4 0 161 310 13 62 PWU14824.1 MAG: orotidine-5'-phosphate decarboxylase [Chlamydiota bacterium] diamond 300 89.7 0.992196209587514 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;