RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA986547", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJNA986547 · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24223951 24223951 PRJNA986547_P_NODE_5859_length_271_cov_1.202020_g5777_i0 PRJNA986547 5859 271 1.20202 3.2574742 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 133 7.22e-35   NR XP_013759822.1 461836 g5777 i0 72.4 3.9520295202952 87 23 95.2 1 11 268 219 305 XP_013759822.1 actin-like protein 3 [Thecamonas trahens ATCC 50062] diamond 1071 133 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
25200384 25200384 PRJNA986547_P_NODE_17540_length_196_cov_5.105691_g17458_i0 PRJNA986547 17540 196 5.105691 10.00715436 Thecamonas trahens 529818 Root_unresolved Root_unresolved 228 2.619999999999999e-55   NTclustered gi|923133736|ref|XM_013904880.1| 461836 g17458 i0 87.692 83.0714285714286 195 24 99 0 1 195 195 389 Thecamonas trahens ATCC 50062 ADP-ribosylation factor 1 (AMSG_02990), mRNA blastn 16282 228 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32492697 32492697 PRJNA986547_P_NODE_3979_length_291_cov_1.761468_g3897_i0 PRJNA986547 3979 291 1.761468 5.12587188 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 119 8.07e-29   NR XP_013754784.1 461836 g3897 i0 61.1 0.979381443298969 95 36 97.9 1 2 286 255 348 XP_013754784.1 major vault protein [Thecamonas trahens ATCC 50062] diamond 285 119 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;