RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986481" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA986481 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29457662 29457662 PRJNA986481_P_NODE_34710_length_277_cov_2.346491_g34185_i0 PRJNA986481 34710 277 2.346491 6.49978007 Rhodothermales bacterium 2306054 Bacteria Bacteria 130 3.35e-33   NR HUF08099.1 2306054 g34185 i0 64.4 3.89891696750903 90 32 97.5 0 272 3 345 434 HUF08099.1 NAD-dependent malic enzyme [Rhodothermales bacterium] diamond 1080 130 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
29552451 29552451 PRJNA986481_P_NODE_19270_length_373_cov_1.604938_g18745_i0 PRJNA986481 19270 373 1.604938 5.98641874 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 211 2.9899999999999996e-66   NR HEX9950868.1 2838334 g18745 i0 79.8 7.97050938337802 124 25 99.7 0 2 373 62 185 HEX9950868.1 nitrilase-related carbon-nitrogen hydrolase [Rubricoccaceae bacterium] diamond 2973 211 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;