RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA986481" and tax_phylum = "Perkinsozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA986481 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6076765 6076765 PRJNA986481_P_NODE_3325_length_830_cov_4.165173_g2959_i0 PRJNA986481 3325 830 4.165173 34.5709359 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 125 1.07e-30   NR TEB19254.1 2494336 g2959 i0 34.7 0.907228915662651 251 142 84.2 8 810 112 17 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 753 125 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
13727499 13727499 PRJNA986481_P_NODE_5691_length_669_cov_9.924194_g4979_i1 PRJNA986481 5691 669 9.924194 66.39285786 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 275 1.05e-90   NR XP_002778466.1 423536 g4979 i1 70 0.852017937219731 190 56 84.8 1 606 40 1 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 570 275 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
23925953 23925953 PRJNA986481_P_NODE_26079_length_321_cov_2.727941_g25554_i0 PRJNA986481 26079 321 2.727941 8.75669061 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 71.3 8.31e-8   NTclustered gi|294947933|ref|XM_002785487.1| 423536 g25554 i0 77.876 0.35202492211838 113 25 35 0 209 321 161 49 Perkinsus marinus ATCC 50983 40S ribosomal protein S29-B, putative, mRNA blastn 113 71.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
25199436 25199436 PRJNA986481_P_NODE_15040_length_423_cov_1.647059_g14515_i0 PRJNA986481 15040 423 1.647059 6.96705957 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 222 1.41e-69   NR XP_002774056.1 423536 g14515 i0 75 0.99290780141844 140 35 99.3 0 4 423 158 297 XP_002774056.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 420 222 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
25200068 25200068 PRJNA986481_P_NODE_5420_length_683_cov_4.952681_g4979_i0 PRJNA986481 5420 683 4.952681 33.82681123 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 274 1.73e-90   NR XP_002778466.1 423536 g4979 i0 70.5 0.834553440702782 190 55 83 1 620 54 1 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 570 274 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27506518 27506518 PRJNA986481_P_NODE_16683_length_402_cov_1.348442_g16158_i0 PRJNA986481 16683 402 1.348442 5.42073684 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 147 2.889999999999999e-38   NR KAF4657204.1 32597 g16158 i0 56.2 6.40298507462687 121 49 88.1 2 21 374 207 326 KAF4657204.1 hypothetical protein FOZ61_006415 [Perkinsus olseni] diamond 2574 148 0.993243243243243 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28921064 28921064 PRJNA986481_P_NODE_35968_length_272_cov_1.686099_g35443_i0 PRJNA986481 35968 272 1.686099 4.58618928 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 87.8 7.29e-18   NR TEB19866.1 2494336 g35443 i0 95.3 0.474264705882353 43 2 47.4 0 252 124 521 563 TEB19866.1 Aldehyde/histidinol dehydrogenase [Perkinsus sp. BL_2016] diamond 129 87.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
29047659 29047659 PRJNA986481_P_NODE_8828_length_548_cov_2.328657_g8315_i0 PRJNA986481 8828 548 2.328657 12.76104036 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 211 3.78e-66   NR XP_002778466.1 423536 g8315 i0 65.6 0.85948905109489 157 49 85.4 2 548 81 38 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 471 211 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30974362 30974362 PRJNA986481_P_NODE_13954_length_439_cov_1.374359_g13430_i0 PRJNA986481 13954 439 1.374359 6.03343601 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 129 3.36e-34   NR XP_002783965.1 423536 g13430 i0 48.5 8.56947608200456 130 66 88.8 1 390 1 80 208 XP_002783965.1 Rab11, putative [Perkinsus marinus ATCC 50983] diamond 3762 129 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31422768 31422768 PRJNA986481_P_NODE_23356_length_339_cov_2.641379_g22831_i0 PRJNA986481 23356 339 2.641379 8.95427481 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 106 5.95e-24   NR KAF4656785.1 32597 g22831 i0 43.4 4.66371681415929 106 60 93.8 0 339 22 56 161 KAF4656785.1 5', 3'-nucleotidase, cytosolic [Perkinsus olseni] diamond 1581 106 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31796177 31796177 PRJNA986481_P_NODE_2857_length_881_cov_6.813702_g2508_i0 PRJNA986481 2857 881 6.813702 60.02871462 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 157 1.2399999999999997e-42   NR TEB19254.1 2494336 g2508 i0 44.9 0.735527809307605 216 108 70.8 3 29 652 51 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 648 157 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;