RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA986481" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA986481 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7351269 7351269 PRJNA986481_P_NODE_29466_length_301_cov_1387.654762_g28941_i0 PRJNA986481 29466 301 1387.654762 4176.84083362 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 1.26e-25   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g28941 i0 100 4.41196013289037 70 0 51 0 124 193 71 2 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 1328 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
9901637 9901637 PRJNA986481_P_NODE_29108_length_303_cov_1448.456693_g28583_i0 PRJNA986481 29108 303 1448.456693 4388.82377979 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 1.27e-25   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g28583 i0 100 7.22772277227723 70 0 41 0 109 178 2 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 2190 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
28384408 28384408 PRJNA986481_P_NODE_21126_length_357_cov_1.142857_g20601_i0 PRJNA986481 21126 357 1.142857 4.07999949 Rhizopus microsporus phasma-like virus 1 3156537 Viruses Viruses 89.4 6.71e-18   NR BFM51670.1 3156537 g20601 i0 38.9 0.798319327731092 95 58 79.8 0 302 18 1455 1549 BFM51670.1 RNA-dependent RNA polymerase [Rhizopus microsporus phasma-like virus 1] diamond 285 89.4 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae   Rhizopus microsporus phasma-like virus 1
31195038 31195038 PRJNA986481_P_NODE_31475_length_291_cov_2.223140_g30950_i0 PRJNA986481 31475 291 2.22314 6.4693374 Bunyaviricetes sp. 3240187 Viruses Viruses 67.4 1.46e-10   NR XKB76341.1 3240187 g30950 i0 40.7 1.87628865979381 91 52 93.8 1 18 290 1557 1645 XKB76341.1 MAG: RNA-dependent RNA polymerase [Bunyaviricetes sp.] diamond 546 67.4 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes       Bunyaviricetes sp.
32081054 32081054 PRJNA986481_P_NODE_21438_length_354_cov_1.832787_g20913_i0 PRJNA986481 21438 354 1.832787 6.48806598 Bunyaviricetes sp. 3240187 Viruses Viruses 71.2 1.42e-11   NR XKB76342.1 3240187 g20913 i0 42.6 0.855932203389831 101 55 85.6 2 21 323 574 671 XKB76342.1 MAG: RNA-dependent RNA polymerase, partial [Bunyaviricetes sp.] diamond 303 71.2 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes       Bunyaviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;