RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA986481" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA986481 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27500496 27500496 PRJNA986481_P_NODE_13703_length_443_cov_1.710660_g13179_i0 PRJNA986481 13703 443 1.71066 7.5782238 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 97.8 5.28e-22   NR ETN98481.1 46433 g13179 i0 43.5 1.98419864559819 147 75 99.5 5 441 1 60 198 ETN98481.1 hypothetical protein RFI_39015, partial [Reticulomyxa filosa] diamond 879 97.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27500536 27500536 PRJNA986481_P_NODE_41063_length_262_cov_1.746479_g40538_i0 PRJNA986481 41063 262 1.746479 4.57577498 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 61.2 1.35e-8   NR ETO13918.1 46433 g40538 i0 45.3 0.606870229007634 53 29 60.7 0 196 38 117 169 ETO13918.1 hypothetical protein RFI_23451, partial [Reticulomyxa filosa] diamond 159 61.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27721849 27721849 PRJNA986481_P_NODE_22324_length_347_cov_1.916107_g21799_i0 PRJNA986481 22324 347 1.916107 6.64889129 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 90.1 1.47e-18   NR ETO27167.1 46433 g21799 i0 44.9 2.93948126801153 118 61 99.4 3 347 3 167 283 ETO27167.1 ATP-binding cassette superfamily [Reticulomyxa filosa] diamond 1020 90.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29300111 29300111 PRJNA986481_P_NODE_3209_length_842_cov_1.677175_g2846_i0 PRJNA986481 3209 842 1.677175 14.1218135 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 118 6.67e-28   NR ETO23731.1 46433 g2846 i0 35.1 0.80166270783848 225 130 78.7 6 828 166 17 229 ETO23731.1 hypothetical protein RFI_13446, partial [Reticulomyxa filosa] diamond 675 118 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30405968 30405968 PRJNA986481_P_NODE_30353_length_297_cov_1.221774_g29828_i0 PRJNA986481 30353 297 1.221774 3.62866878 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 74.7 2e-13   NR ETO32916.1 46433 g29828 i0 60.8 0.515151515151515 51 18 51.5 1 252 100 85 133 ETO32916.1 hypothetical protein RFI_04200 [Reticulomyxa filosa] diamond 153 74.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30443222 30443222 PRJNA986481_P_NODE_38953_length_265_cov_0.935185_g38428_i0 PRJNA986481 38953 265 0.935185 2.47824025 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.6 6.24e-7   NR ETO00109.1 46433 g38428 i0 38.7 4.94716981132075 75 40 81.5 2 46 261 269 340 ETO00109.1 hypothetical protein RFI_37350, partial [Reticulomyxa filosa] diamond 1311 57 0.992982456140351 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30531829 30531829 PRJNA986481_P_NODE_1873_length_1044_cov_2.681407_g1596_i0 PRJNA986481 1873 1044 2.681407 27.99388908 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 174 1.66e-46   NR ETO32845.1 46433 g1596 i0 36.7 0.885057471264368 308 177 86.8 10 3 908 80 375 ETO32845.1 hypothetical protein RFI_04271 [Reticulomyxa filosa] diamond 924 174 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;