RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA986481" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA986481 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7351193 7351193 PRJNA986481_P_NODE_25386_length_326_cov_1.458484_g24861_i0 PRJNA986481 25386 326 1.458484 4.75465784 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 141 2.24e-36   NR MBF0407784.1 2053586 g24861 i0 60.2 1.9601226993865 108 43 99.4 0 1 324 224 331 MBF0407784.1 NADP-dependent isocitrate dehydrogenase [Candidatus Rifleibacteriota bacterium] diamond 639 141 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32870681 32870681 PRJNA986481_P_NODE_7880_length_579_cov_1.430189_g7375_i0 PRJNA986481 7880 579 1.430189 8.28079431 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 55.8 1.14e-5   NR HOI90065.1 3022866 g7375 i0 31.9 3.0880829015544 119 75 61.1 2 12 365 51 164 HOI90065.1 ankyrin repeat domain-containing protein [Candidatus Rifleibacterium sp.] diamond 1788 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;