RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA986481" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA986481 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28068685 28068685 PRJNA986481_P_NODE_28325_length_308_cov_1.683398_g27800_i0 PRJNA986481 28325 308 1.683398 5.18486584 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 51.6 5.88e-5   NR HET6512553.1 2447898 g27800 i0 31.6 0.954545454545455 98 63 91.6 2 306 25 238 335 HET6512553.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 294 51.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28605474 28605474 PRJNA986481_P_NODE_31767_length_290_cov_1.593361_g31242_i0 PRJNA986481 31767 290 1.593361 4.6207469 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 54.7 4.07e-6   NR HVZ37761.1 2447898 g31242 i0 48.3 0.620689655172414 60 27 62.1 1 182 3 513 568 HVZ37761.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 180 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29615504 29615504 PRJNA986481_P_NODE_35910_length_272_cov_1.874439_g35385_i0 PRJNA986481 35910 272 1.874439 5.09847408 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 164 3.849999999999999e-47   NR MCU0426337.1 2447898 g35385 i0 88.6 0.970588235294118 88 10 97.1 0 7 270 23 110 MCU0426337.1 CoA transferase [Candidatus Kapaibacterium sp.] diamond 264 164 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;