RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA986481" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA986481 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26874446 26874446 PRJNA986481_P_NODE_59661_length_241_cov_12.015625_g59136_i0 PRJNA986481 59661 241 12.015625 28.95765625 Pseudomonadati 3379134 Bacteria Bacteria 53.9 3.94e-6   NR MFN2425231.1 2838779 g59136 i0 63.6 2.16597510373444 33 12 41.1 0 148 50 305 337 MFN2425231.1 NADP-dependent oxidoreductase [Candidatus Binatia bacterium] diamond 522 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29931837 29931837 PRJNA986481_P_NODE_4651_length_727_cov_3.485251_g4230_i0 PRJNA986481 4651 727 3.485251 25.33777477 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 149 6.03e-40   NR HKN02187.1 2785449 g4230 i0 43.3 2.30261348005502 201 101 82.9 4 2 604 104 291 HKN02187.1 alpha/beta hydrolase [Candidatus Binataceae bacterium] diamond 1674 149 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30658333 30658333 PRJNA986481_P_NODE_54993_length_247_cov_1.020202_g54468_i0 PRJNA986481 54993 247 1.020202 2.51989894 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 75.9 7.87e-14   NR MFN2374985.1 2838779 g54468 i0 45.5 1.06882591093117 88 36 99.6 3 246 1 341 422 MFN2374985.1 ice-binding family protein [Candidatus Binatia bacterium] diamond 264 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;