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contig_metadata

14 rows where bioproject = "PRJNA986481" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 14 ✖

bioproject 1

  • PRJNA986481 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2249179 2249179 PRJNA986481_P_NODE_59562_length_242_cov_1.046632_g59037_i0 PRJNA986481 59562 242 1.046632 2.53284944 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 392 1.1299999999999999e-104   NTclustered gi|985614202|gb|CP010834.1| 1609968 g59037 i0 95.868 10.9876033057851 242 10 100 0 1 242 219271 219030 Methanobrevibacter sp. YE315, complete genome blastn 2659 392 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
11176593 11176593 PRJNA986481_P_NODE_14029_length_438_cov_1.120823_g13505_i0 PRJNA986481 14029 438 1.120823 4.90920474 Methanolobus sp. ZRKC2 3125783 Archaea Archaea 54.7 0.012   NTclustered gi|2708450131|gb|CP146980.1| 3125783 g13505 i0 92.308 0.089041095890411 39 1 9 2 282 319 2375858 2375821 Methanolobus sp. ZRKC2 chromosome, complete genome blastn 39 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp. ZRKC2
13727130 13727130 PRJNA986481_P_NODE_32951_length_285_cov_1.233051_g32426_i0 PRJNA986481 32951 285 1.233051 3.51419535 Methanobrevibacter sp. 66852 Archaea Archaea 152 1.99e-41   NR WP_405289692.1 66852 g32426 i0 77.7 2.96842105263158 94 20 98.9 1 284 3 26 118 WP_405289692.1 molecular chaperone DnaK, partial [Methanobrevibacter sp.] diamond 846 152 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
15300002 15300002 PRJNA986481_P_NODE_38132_length_266_cov_0.930876_g37607_i0 PRJNA986481 38132 266 0.930876 2.47613016 Halalkalicoccus 332246 Archaea Archaea 446 9.549999999999999e-121   NTclustered gi|1779814881|ref|NR_164956.1| 2675002 g37607 i0 96.992 101.661654135338 266 7 99 1 2 266 281 16 Halalkalicoccus subterraneus strain GSM28 16S ribosomal RNA, partial sequence blastn 27042 446 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus subterraneus
26747047 26747047 PRJNA986481_P_NODE_50541_length_252_cov_0.970443_g50016_i0 PRJNA986481 50541 252 0.97044299999999994 2.44551636 Thermococcus 2263 Archaea Archaea 99 2.88e-22   NR MEO2152120.1 35749 g50016 i0 62 7.54761904761905 79 30 94 0 11 247 134 212 MEO2152120.1 RtcB family protein [Thermococcus sp.] diamond 1902 99 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.
27342660 27342660 PRJNA986481_P_NODE_10963_length_494_cov_4.656180_g10441_i0 PRJNA986481 10963 494 4.65618 23.0015292 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 228 4.49e-67   NR WP_295614768.1 253161 g10441 i0 73.6 0.874493927125506 144 38 87.4 0 3 434 677 820 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 432 228 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
27658441 27658441 PRJNA986481_P_NODE_14544_length_430_cov_2.036745_g14019_i0 PRJNA986481 14544 430 2.036745 8.7580035 Haloferacaceae 1644056 Archaea Archaea 67.4 7.42e-10   NR WP_122104754.1 1644056 g14019 i0 34.7 4.08837209302326 118 66 76.7 3 365 36 1912 2026 WP_122104754.1 MULTISPECIES: malectin domain-containing carbohydrate-binding protein [Haloferacaceae] diamond 1758 67.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae    
28258027 28258027 PRJNA986481_P_NODE_56506_length_245_cov_1.030612_g55981_i0 PRJNA986481 56506 245 1.030612 2.5249994 Methanobacterium sp. 2164 Archaea Archaea 128 2.09e-33   NR TMS43079.1 2164 g55981 i0 75.9 1.93469387755102 79 19 96.7 0 238 2 21 99 TMS43079.1 MAG: DUF2117 domain-containing protein [Methanobacterium sp.] diamond 474 128 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
28794716 28794716 PRJNA986481_P_NODE_39467_length_264_cov_2.083721_g38942_i0 PRJNA986481 39467 264 2.083721 5.50102344 Methanobrevibacter sp. 66852 Archaea Archaea 48.9 1.36e-4   NR MEE3444538.1 66852 g38942 i0 46.4 0.636363636363636 56 29 62.5 1 258 94 108 163 MEE3444538.1 40S ribosomal protein S19 [Methanobrevibacter sp.] diamond 168 48.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29079225 29079225 PRJNA986481_P_NODE_60528_length_241_cov_1.046875_g60003_i0 PRJNA986481 60528 241 1.046875 2.52296875 Methanoregulaceae archaeon 2485498 Archaea Archaea 48.9 2.33e-4   NR RPI38806.1 2485498 g60003 i0 39.7 0.721991701244813 58 32 72.2 1 63 236 185 239 RPI38806.1 MAG: hypothetical protein EHM53_07905 [Methanoregulaceae archaeon] diamond 174 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
30026538 30026538 PRJNA986481_P_NODE_40331_length_263_cov_1.345794_g39806_i0 PRJNA986481 40331 263 1.345794 3.53943822 Methanococcus voltae 2188 Archaea Archaea 48.5 4.37e-4   NR WP_013180395.1 2188 g39806 i0 42.9 1.42585551330798 63 28 69.6 2 226 44 635 691 WP_013180395.1 protease inhibitor I42 family protein [Methanococcus voltae] diamond 375 48.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus voltae
30632502 30632502 PRJNA986481_P_NODE_51633_length_250_cov_1.875622_g51108_i0 PRJNA986481 51633 250 1.875622 4.689055 Methanomicrobiales 2191 Archaea Archaea 49.7 1.39e-4   NR WP_346733691.1 90427 g51108 i0 37.8 3.732 82 28 94.8 3 3 239 201 262 WP_346733691.1 kelch repeat-containing protein [Methanoculleus sp.] diamond 933 50.1 0.992015968063872 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
31069258 31069258 PRJNA986481_P_NODE_28435_length_307_cov_3.449612_g27910_i0 PRJNA986481 28435 307 3.449612 10.59030884 Candidatus Methanophagales archaeon 2056316 Archaea Archaea 45.8 0.00585   NR MCR5852524.1 2056316 g27910 i0 29.3 1.60260586319218 82 57 80.1 1 302 57 81 161 MCR5852524.1 hypothetical protein [Candidatus Methanophagales archaeon] diamond 492 45.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales     Candidatus Methanophagales archaeon
32618765 32618765 PRJNA986481_P_NODE_61080_length_237_cov_2.473404_g60555_i0 PRJNA986481 61080 237 2.473404 5.86196748 Thermoplasmatota archaeon 2806419 Archaea Archaea 60.5 1.54e-9   NR MCL5804599.1 2806419 g60555 i0 67.5 0.506329113924051 40 13 50.6 0 23 142 79 118 MCL5804599.1 nascent polypeptide-associated complex protein [Thermoplasmatota archaeon] diamond 120 60.5 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;