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contig_metadata

5 rows where bioproject = "PRJNA986481", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 5 ✖

tax_kingdom 1

  • Bacillati · 5 ✖

bioproject 1

  • PRJNA986481 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16276527 16276527 PRJNA986481_P_NODE_40513_length_263_cov_0.943925_g39988_i0 PRJNA986481 40513 263 0.943925 2.4825227499999998 Spiroplasma culicicola 216935 Bacteria Bacteria 62.1 3.99e-5   NTclustered gi|583840421|gb|CP006681.1| 1276246 g39988 i0 97.222 0.136882129277567 36 1 14 0 138 173 514752 514717 Spiroplasma culicicola AES-1, complete genome blastn 36 62.1 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma culicicola
20398528 20398528 PRJNA986481_P_NODE_5276_length_691_cov_9.646417_g4838_i0 PRJNA986481 5276 691 9.646417 66.65674147 Mycoplasmopsis 2767358 Bacteria Bacteria 54.7 0.019   NTclustered gi|1776910936|gb|CP034544.1| 2109 g4838 i0 100 0.671490593342981 29 0 4 0 99 127 41127 41155 Mycoplasmopsis synoviae strain HN01 chromosome, complete genome blastn 464 54.7 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis synoviae
20398568 20398568 PRJNA986481_P_NODE_60716_length_239_cov_11.394737_g60191_i0 PRJNA986481 60716 239 11.394737 27.23342143 Mycoplasmoides 2995234 Bacteria Bacteria 91.6 4.55e-14   NTclustered gi|1190813395|gb|CP017340.1| 2104 g60191 i0 74.654 88.0376569037657 217 50 89 5 27 239 120023 120238 Mycoplasmoides pneumoniae strain RI3 chromosome, complete genome blastn 21041 91.6 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Mycoplasmoidaceae Mycoplasmoides Mycoplasmoides pneumoniae
26994511 26994511 PRJNA986481_P_NODE_49862_length_252_cov_1.660099_g49337_i0 PRJNA986481 49862 252 1.660099 4.18344948 Mycoplasma sp. CAG:956 1262908 Bacteria Bacteria 45.1 0.00638   NR CCY88706.1 1262908 g49337 i0 30.2 0.630952380952381 53 37 63.1 0 82 240 235 287 CCY88706.1 helicase associated domain [Mycoplasma sp. CAG:956] diamond 159 45.1 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma sp. CAG:956
28516762 28516762 PRJNA986481_P_NODE_41967_length_261_cov_1.429245_g41442_i0 PRJNA986481 41967 261 1.429245 3.73032945 Bacteria 2 Bacteria Bacteria 48.5 1.67e-4   NR HHU55313.1 1898209 g41442 i0 50 4.04597701149425 50 22 57.5 1 108 257 77 123 HHU55313.1 dCMP deaminase family protein [Acholeplasmataceae bacterium] diamond 1056 48.5 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;